RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MBD4O95243 580 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 FAM228BP0C875 321 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 UBTFL6P0CB48 400 aaPredicted RBP14.34□□□□□ -0.11
IFT88-202ENST00000351808 EPHB2P29323 1055 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 VHLP40337 213 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 PKN1Q16512 942 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 DNAAF5Q86Y56 855 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 ANKRD42Q8N9B4 389 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
IFT88-202ENST00000351808 SCG3Q8WXD2 468 aaKnown RBP14.34□□□□□ -0.11
IFT88-202ENST00000351808 TBC1D10AQ9BXI6 508 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 MYLK2Q9H1R3 596 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 LRMDAQ9H2I8 198 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 LUC7LQ9NQ29 371 aaKnown RBP14.34□□□□□ -0.11
IFT88-202ENST00000351808 METTL5Q9NRN9 209 aaKnown RBP14.34□□□□□ -0.11
IFT88-202ENST00000351808 ADAMTS1Q9UHI8 967 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 PALM3A6NDB9 673 aaPredicted RBP14.34□□□□□ -0.11
IFT88-202ENST00000351808 ZCCHC18P0CG32 403 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 FCER1AP12319 257 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 PLTPP55058 493 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 CASP7P55210 303 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 KCNMA1Q12791 1236 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 SNX30Q5VWJ9 437 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 DAAM2Q86T65 1068 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 AGGF1Q8N302 714 aaeCLIP14.34□□□□□ -0.11
IFT88-202ENST00000351808 GATA6Q92908 595 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 SPATA16Q9BXB7 569 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 IQCGQ9H095 443 aaKnown RBP14.34□□□□□ -0.11
IFT88-202ENST00000351808 SEMA4AQ9H3S1 761 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 SLITRK6Q9H5Y7 841 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 DISC1Q9NRI5 854 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 ETNK2Q9NVF9 386 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 PXDNQ92626 1479 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 BCL9O00512 1426 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 CES2O00748 559 aa14.33□□□□□ -0.11
IFT88-202ENST00000351808 PDE4DQ08499 809 aa14.33□□□□□ -0.11
IFT88-202ENST00000351808 CGB2Q6NT52 195 aa14.33□□□□□ -0.11
IFT88-202ENST00000351808 ZNF365Q70YC5 407 aa14.33□□□□□ -0.11
IFT88-202ENST00000351808 CCDC84Q86UT8 332 aaPredicted RBP14.33□□□□□ -0.11
IFT88-202ENST00000351808 EXOC3L1Q86VI1 746 aa14.33□□□□□ -0.11
IFT88-202ENST00000351808 HPS3Q969F9 1004 aa14.33□□□□□ -0.11
IFT88-202ENST00000351808 STOML1Q9UBI4 398 aa14.33□□□□□ -0.11
IFT88-202ENST00000351808 A2ML1A8K2U0 1454 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 EIF4BP23588 611 aaKnown RBP14.33□□□□□ -0.12
IFT88-202ENST00000351808 KHDC1Q4VXA5 237 aaKnown RBP14.33□□□□□ -0.12
IFT88-202ENST00000351808 PIK3AP1Q6ZUJ8 805 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 NRG4Q8WWG1 115 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 NCSTNQ92542 709 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 HIC2Q96JB3 615 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 IWS1Q96ST2 819 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 DCLRE1BQ9H816 532 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 PDP2Q9P2J9 529 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 CHMP2BQ9UQN3 213 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 NR2E1Q9Y466 385 aa14.33□□□□□ -0.12
IFT88-202ENST00000351808 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
IFT88-202ENST00000351808 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.32□□□□□ -0.12
IFT88-202ENST00000351808 TMEM120BA0PK00 339 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 LSAMPQ13449 338 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 AUHQ13825 339 aaKnown RBP14.32□□□□□ -0.12
IFT88-202ENST00000351808 CCDC152Q4G0S7 254 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 SPDYCQ5MJ68 293 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 INTS8Q75QN2 995 aaKnown RBP14.32□□□□□ -0.12
IFT88-202ENST00000351808 ZNF654Q8IZM8 581 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 WASHC2DQ5SRD0 308 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 SFMBT2Q5VUG0 894 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 RNF43Q68DV7 783 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 ZNF449Q6P9G9 518 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 TAOK1Q7L7X3 1001 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 ZDHHC18Q9NUE0 388 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 USP20Q9Y2K6 914 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 ROBO2Q9HCK4 1378 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 SPATA31A3Q5VYP0 1347 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 FOXO6A8MYZ6 492 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 RASGRF2O14827 1237 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 SERPING1P05155 500 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 RPL13P26373 211 aaKnown RBP14.32□□□□□ -0.12
IFT88-202ENST00000351808 COPB2P35606 906 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 SLC18A3Q16572 532 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 P3H1Q32P28 736 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 ARMCX6Q7L4S7 300 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 ADAT2Q7Z6V5 191 aaKnown RBP14.32□□□□□ -0.12
IFT88-202ENST00000351808 ARHGAP18Q8N392 663 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 FBXO25Q8TCJ0 367 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 RNF26Q9BY78 433 aaPredicted RBP14.32□□□□□ -0.12
IFT88-202ENST00000351808 SEMA6BQ9H3T3 888 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 KCNK9Q9NPC2 374 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 SNX24Q9Y343 169 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 GMEB1Q9Y692 573 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 SLC4A7Q9Y6M7 1214 aa14.32□□□□□ -0.12
IFT88-202ENST00000351808 BAZ2BQ9UIF8 2168 aaKnown RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 TMCC1O94876 653 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 GH1P01241 217 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 FUT4P22083 530 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 ADD2P35612 726 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 CERKLQ49MI3 558 aaPredicted RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 C1orf141Q5JVX7 400 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms