RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZNF263O14978 683 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 AKAP3O75969 853 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 SERPING1P05155 500 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 DSG3P32926 999 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
SAMM50-201ENST00000350028 AMPD2Q01433 879 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 CYP27A1Q02318 531 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 TEX35Q5T0J7 233 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 FIZ1Q96SL8 496 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 RMDN3Q96TC7 470 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 MKNK1Q9BUB5 465 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 MAF1Q9H063 256 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 GANQ9H2C0 597 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 RNF146Q9NTX7 359 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 PKD2L1Q9P0L9 805 aa18.34■□□□□ 0.53
SAMM50-201ENST00000350028 RCCD1A6NED2 376 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 MAPTP10636 758 aaKnown RBP18.33■□□□□ 0.52
SAMM50-201ENST00000350028 MYCLP12524 364 aaPredicted RBP18.33■□□□□ 0.52
SAMM50-201ENST00000350028 QARSP47897 775 aaKnown RBP18.33■□□□□ 0.52
SAMM50-201ENST00000350028 ASTE1Q2TB18 679 aaPredicted RBP18.33■□□□□ 0.52
SAMM50-201ENST00000350028 ODR4Q5SWX8 454 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 ARHGEF16Q5VV41 709 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 HGSNATQ68CP4 663 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 PADI6Q6TGC4 694 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 NSMFQ6X4W1 530 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 REPS2Q8NFH8 660 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 CRACR2AQ9BSW2 395 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 IFIH1Q9BYX4 1025 aaKnown RBP18.33■□□□□ 0.52
SAMM50-201ENST00000350028 ADAMTS5Q9UNA0 930 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 ZHX2Q9Y6X8 837 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 ZMYM2Q9UBW7 1377 aa18.33■□□□□ 0.52
SAMM50-201ENST00000350028 CLIC2O15247 247 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 PPP1R12BO60237 982 aaPredicted RBP18.32■□□□□ 0.52
SAMM50-201ENST00000350028 HIP1RO75146 1068 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 PSMC2P35998 433 aaKnown RBP18.32■□□□□ 0.52
SAMM50-201ENST00000350028 MAGEA1P43355 309 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 JAK3P52333 1124 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 KCNA1Q09470 495 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 COG2Q14746 738 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
SAMM50-201ENST00000350028 NOL9Q5SY16 702 aaKnown RBP18.32■□□□□ 0.52
SAMM50-201ENST00000350028 PAPD7Q5XG87 772 aaKnown RBP18.32■□□□□ 0.52
SAMM50-201ENST00000350028 HS2ST1Q7LGA3 356 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 GOLGA5Q8TBA6 731 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 TRPM4Q8TD43 1214 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 SECISBP2LQ93073 1101 aaKnown RBP18.32■□□□□ 0.52
SAMM50-201ENST00000350028 KLRG1Q96E93 195 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 AIPL1Q9NZN9 384 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 OGFRQ9NZT2 677 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 DDX41Q9UJV9 622 aaKnown RBP18.32■□□□□ 0.52
SAMM50-201ENST00000350028 TFR2Q9UP52 801 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 PHIPQ8WWQ0 1821 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 ANO9A1A5B4 782 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 PJA2O43164 708 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 SFNP31947 248 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 MAPK7Q13164 816 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 ALCAMQ13740 583 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 SUPT20HL1Q3ZLR7 823 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 TRAPPC11Q7Z392 1133 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 GPC2Q8N158 579 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 BORCS6Q96GS4 357 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 TIPINQ9BVW5 301 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 STRA6Q9BX79 667 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 TMOD4Q9NZQ9 345 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 TCEAL9Q9UHQ7 104 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 SAMM50Q9Y512 469 aa18.32■□□□□ 0.52
SAMM50-201ENST00000350028 MYH11P35749 1972 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 RLFQ13129 1914 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 GTPBP10A4D1E9 387 aaKnown RBP18.31■□□□□ 0.52
SAMM50-201ENST00000350028 POTEB2H3BUK9 544 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 MAFGO15525 162 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 CCND2P30279 289 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 CASP4P49662 377 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 CLCN6P51797 869 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 HMGCS2P54868 508 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 KRT76Q01546 638 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 BAATQ14032 418 aaPredicted RBP18.31■□□□□ 0.52
SAMM50-201ENST00000350028 MYBPC2Q14324 1141 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 TDRD12Q587J7 1177 aaKnown RBP18.31■□□□□ 0.52
SAMM50-201ENST00000350028 PRAMEF18Q5VWM3 479 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 GBP6Q6ZN66 633 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 C4orf19Q8IY42 314 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 FAM186BQ8IYM0 893 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 RDM1Q8NG50 284 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 GBP3Q9H0R5 595 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 LUC7LQ9NQ29 371 aaKnown RBP18.31■□□□□ 0.52
SAMM50-201ENST00000350028 DMAC2Q9NW81 257 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 GGA3Q9NZ52 723 aa18.31■□□□□ 0.52
SAMM50-201ENST00000350028 LARSQ9P2J5 1176 aaKnown RBP18.31■□□□□ 0.52
SAMM50-201ENST00000350028 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
SAMM50-201ENST00000350028 CTAGE15A4D2H0 777 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 TLR2O60603 784 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 TACC1O75410 805 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 CTAGE8P0CG41 777 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 RARRES1P49788 294 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 ASIC2Q16515 512 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms