RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PPM1EQ8WY54 764 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 DRC1Q96MC2 740 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 POLR3CQ9BUI4 534 aaPredicted RBP23.38■■□□□ 1.33
PTPN18-202ENST00000347849 GOLGA6AQ9NYA3 693 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 EPHB6O15197 1021 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 PLEKP08567 350 aaPredicted RBP23.38■■□□□ 1.33
PTPN18-202ENST00000347849 EPS15P42566 896 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 CCDC42Q96M95 316 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 ZNF577Q9BSK1 485 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 UNC45AQ9H3U1 944 aa23.38■■□□□ 1.33
PTPN18-202ENST00000347849 SFI1A8K8P3 1242 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 ZNF263O14978 683 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 MATR3P43243 847 aaKnown RBP eCLIP23.37■■□□□ 1.331e-6■■■■□ 25.1
PTPN18-202ENST00000347849 IQCEQ6IPM2 695 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 CCDC70Q6NSX1 233 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 SND1Q7KZF4 910 aaKnown RBP eCLIP23.37■■□□□ 1.33
PTPN18-202ENST00000347849 SFR1Q86XK3 245 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 CREG2Q8IUH2 290 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 RETREG2Q8NC44 543 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 LRRC1Q9BTT6 524 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 WDR11Q9BZH6 1224 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 KCTD10Q9H3F6 313 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 FAM184BQ9ULE4 1060 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 DDX39AO00148 427 aaKnown RBP23.37■■□□□ 1.33
PTPN18-202ENST00000347849 SLC26A4O43511 780 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 GAS7O60861 476 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 VAV2P52735 878 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 PPP2R5CQ13362 524 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 SPA17Q15506 151 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 VWA3BQ502W6 1294 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 GGA3Q9NZ52 723 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 DMGDHQ9UI17 866 aaKnown RBP23.37■■□□□ 1.33
PTPN18-202ENST00000347849 PPP1R9AQ9ULJ8 1098 aa23.37■■□□□ 1.33
PTPN18-202ENST00000347849 TRAF5O00463 557 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 HOXD13P35453 343 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 AENQ8WTP8 325 aaKnown RBP23.36■■□□□ 1.33
PTPN18-202ENST00000347849 NDST4Q9H3R1 872 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 RIPK3Q9Y572 518 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 PITPNM2Q9BZ72 1349 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 PTPRAP18433 802 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 IRAK1P51617 712 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 PRKG1Q13976 671 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 SCYL3Q8IZE3 742 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 ATG4CQ96DT6 458 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 RABEP2Q9H5N1 569 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 GPRC5DQ9NZD1 345 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 SNX12Q9UMY4 172 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 RABGAP1Q9Y3P9 1069 aa23.36■■□□□ 1.33
PTPN18-202ENST00000347849 SLC7A5Q01650 507 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 ARHGAP27Q6ZUM4 889 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 GPIHBP1Q8IV16 184 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 SYTL5Q8TDW5 730 aaPredicted RBP23.35■■□□□ 1.33
PTPN18-202ENST00000347849 MXRA8Q9BRK3 442 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 ZNF112Q9UJU3 913 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 JRKLQ9Y4A0 524 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 IPO5O00410 1097 aaKnown RBP23.35■■□□□ 1.33
PTPN18-202ENST00000347849 SHOX2O60902 331 aaPredicted RBP23.35■■□□□ 1.33
PTPN18-202ENST00000347849 EYA4O95677 639 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 MYBP10242 640 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 BACE1P56817 501 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 MRPS9P82933 396 aaKnown RBP23.35■■□□□ 1.33
PTPN18-202ENST00000347849 TAAR1Q96RJ0 339 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 ERGIC2Q96RQ1 377 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 PSMB7Q99436 277 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 IKZF4Q9H2S9 585 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 CAPN6Q9Y6Q1 641 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 ZHX2Q9Y6X8 837 aa23.35■■□□□ 1.33
PTPN18-202ENST00000347849 RPTORQ8N122 1335 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 CCT5P48643 541 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 RPS6P62753 249 aaKnown RBP23.34■■□□□ 1.33
PTPN18-202ENST00000347849 RINT1Q6NUQ1 792 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 B3GNT9Q6UX72 402 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 TSG101Q99816 390 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 MLXIPQ9HAP2 919 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 SIK3Q9Y2K2 1263 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 HMGCS2P54868 508 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 FKBP3Q00688 224 aaKnown RBP23.34■■□□□ 1.33
PTPN18-202ENST00000347849 KCNA1Q09470 495 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 EFCAB13Q8IY85 973 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 MMGT1Q8N4V1 131 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 TRIM58Q8NG06 486 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 TSGA10Q9BZW7 698 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 KCNH7Q9NS40 1196 aa23.34■■□□□ 1.33
PTPN18-202ENST00000347849 USO1O60763 962 aaKnown RBP23.33■■□□□ 1.33
PTPN18-202ENST00000347849 TACC1O75410 805 aa23.33■■□□□ 1.33
PTPN18-202ENST00000347849 MOCS3O95396 460 aa23.33■■□□□ 1.33
PTPN18-202ENST00000347849 EIF2AK2P19525 551 aaKnown RBP23.33■■□□□ 1.33
PTPN18-202ENST00000347849 CXCR5P32302 372 aa23.33■■□□□ 1.33
PTPN18-202ENST00000347849 MAN2A1Q16706 1144 aa23.33■■□□□ 1.33
PTPN18-202ENST00000347849 BANK1Q8NDB2 785 aa23.33■■□□□ 1.33
PTPN18-202ENST00000347849 SPATA4Q8NEY3 305 aa23.33■■□□□ 1.33
PTPN18-202ENST00000347849 IFIH1Q9BYX4 1025 aaKnown RBP23.33■■□□□ 1.33
PTPN18-202ENST00000347849 FAM207AQ9NSI2 230 aaPredicted RBP23.33■■□□□ 1.33
PTPN18-202ENST00000347849 VWA5AO00534 786 aa23.33■■□□□ 1.32
PTPN18-202ENST00000347849 ICE2Q659A1 982 aa23.33■■□□□ 1.32
PTPN18-202ENST00000347849 DCAF15Q66K64 600 aa23.33■■□□□ 1.32
PTPN18-202ENST00000347849 TEX2Q8IWB9 1127 aa23.33■■□□□ 1.32
PTPN18-202ENST00000347849 ZNF280CQ8ND82 737 aa23.33■■□□□ 1.32
PTPN18-202ENST00000347849 EHMT1Q9H9B1 1298 aa23.33■■□□□ 1.32
PTPN18-202ENST00000347849 SMARCAL1Q9NZC9 954 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms