RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 COL1A2P08123 1366 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 IGSF9BQ9UPX0 1349 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 DDX11L8A8MPP1 907 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 MAGEB2O15479 319 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 B4GALT4O60513 344 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 YEATS4O95619 227 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 CD4P01730 458 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNCA-202ENST00000345009 INSRRP14616 1297 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 LONP1P36776 959 aaKnown RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 UBA7P41226 1012 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 PRKCEQ02156 737 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 PKP1Q13835 747 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 SLC39A14Q15043 492 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 TRMT1LQ7Z2T5 733 aaKnown RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 C4orf19Q8IY42 314 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 KCTD17Q8N5Z5 321 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 IGSF22Q8N9C0 903 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 USP28Q96RU2 1077 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 HSD17B14Q9BPX1 270 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 LXNQ9BS40 222 aa13.25□□□□□ -0.29
SNCA-202ENST00000345009 POLR3CQ9BUI4 534 aaPredicted RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 PRDM5Q9NQX1 630 aaPredicted RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 TFIP11Q9UBB9 837 aaKnown RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
SNCA-202ENST00000345009 SPTLC2O15270 562 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 SLC26A4O43511 780 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 SLITRK3O94933 977 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 NUDT7P0C024 238 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 RAG1P15918 1043 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 RPA1P27694 616 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 TMOD1P28289 359 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 TXLNAP40222 546 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 CCT6AP40227 531 aaKnown RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 IGBP1P78318 339 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 KRT85P78386 507 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 CYP4A11Q02928 519 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 PTK7Q13308 1070 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 CTTNQ14247 550 aaKnown RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 FOXD4L6Q3SYB3 417 aaPredicted RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 GDF6Q6KF10 455 aaPredicted RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 FOXD4L3Q6VB84 417 aaPredicted RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 KRI1Q8N9T8 703 aaKnown RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 KCNG4Q8TDN1 519 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 LMBR1Q8WVP7 490 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 DYDC2Q96IM9 177 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 CDK5RAP3Q96JB5 506 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 NIFKQ9BYG3 293 aaKnown RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 RGL1Q9NZL6 768 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
SNCA-202ENST00000345009 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
SNCA-202ENST00000345009 KDM3AQ9Y4C1 1321 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 KIAA0355O15063 1070 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 ZNF862O60290 1169 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 CAND2O75155 1236 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 LYPLA2O95372 231 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 ATP4AP20648 1035 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 KLRC1P26715 233 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 MARCKSP29966 332 aaPredicted RBP13.23□□□□□ -0.29
SNCA-202ENST00000345009 HOXC8P31273 242 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
SNCA-202ENST00000345009 DNM2P50570 870 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 TBC1D8BQ0IIM8 1120 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 PTPAQ15257 358 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 SERINC5Q86VE9 423 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 NME8Q8N427 588 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 LINC00301Q8NCQ3 95 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 RASSF8Q8NHQ8 419 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 IPO9Q96P70 1041 aaKnown RBP13.23□□□□□ -0.29
SNCA-202ENST00000345009 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
SNCA-202ENST00000345009 NT5C3AQ9H0P0 336 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 ANKEF1Q9NU02 776 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 PCDHA2Q9Y5H9 948 aa13.23□□□□□ -0.29
SNCA-202ENST00000345009 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
SNCA-202ENST00000345009 MBLAC1A4D2B0 266 aaPredicted RBP13.22□□□□□ -0.29
SNCA-202ENST00000345009 TREHO43280 583 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 PPP6R2O75170 966 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 PARNO95453 639 aaKnown RBP13.22□□□□□ -0.29
SNCA-202ENST00000345009 TIMP1P01033 207 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 CYP2C9P11712 490 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 CDC42EP1Q00587 391 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 UGCGQ16739 394 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 XKR9Q5GH70 373 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
SNCA-202ENST00000345009 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms