RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 EMC10Q5UCC4 262 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 TBC1D9BQ66K14 1250 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 TMTC3Q6ZXV5 915 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 DZIP1Q86YF9 867 aaKnown RBP9.53□□□□□ -0.88
SP140-201ENST00000343805 KIRREL3Q8IZU9 778 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 SLC43A3Q8NBI5 491 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 UIMC1Q96RL1 719 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 TMCO1Q9UM00 188 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 BZW2Q9Y6E2 419 aaKnown RBP9.53□□□□□ -0.88
SP140-201ENST00000343805 ITGB4P16144 1822 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 SHANK3Q9BYB0 1731 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 FGRP09769 529 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 CCDC159P0C7I6 412 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 BCRP11274 1271 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 SCG2P13521 617 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 CCT5P48643 541 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 GNAQP50148 359 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 UBXN1Q04323 297 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 KRT31Q15323 416 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 NPY5RQ15761 445 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 GALNT17Q6IS24 598 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 HEATR3Q7Z4Q2 680 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 RSPH3Q86UC2 560 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 SLC15A3Q8IY34 581 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 CERKQ8TCT0 537 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 NSUN4Q96CB9 384 aaKnown RBP9.53□□□□□ -0.88
SP140-201ENST00000343805 OXCT2Q9BYC2 517 aaPredicted RBP9.53□□□□□ -0.88
SP140-201ENST00000343805 MKNK2Q9HBH9 465 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 ADD3Q9UEY8 706 aaKnown RBP9.53□□□□□ -0.88
SP140-201ENST00000343805 ZNF652Q9Y2D9 606 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 ATP6V0A2Q9Y487 856 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 TTLL3Q9Y4R7 772 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 COL4A1P02462 1669 aa9.53□□□□□ -0.88
SP140-201ENST00000343805 ABLIM1O14639 778 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 GYPCP04921 128 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 RPSAP08865 295 aaKnown RBP9.52□□□□□ -0.88
SP140-201ENST00000343805 HIBADHP31937 336 aaKnown RBP9.52□□□□□ -0.88
SP140-201ENST00000343805 STAT6P42226 847 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 CCT8P50990 548 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 RPS8P62241 208 aaKnown RBP9.52□□□□□ -0.88
SP140-201ENST00000343805 BEND6Q5SZJ8 279 aaPredicted RBP9.52□□□□□ -0.88
SP140-201ENST00000343805 CEP57Q86XR8 500 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 AFAP1L1Q8TED9 768 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 NELFBQ8WX92 580 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 RNPC3Q96LT9 517 aaKnown RBP9.52□□□□□ -0.88
SP140-201ENST00000343805 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.52□□□□□ -0.88
SP140-201ENST00000343805 SUGCTQ9HAC7 445 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 ATXN10Q9UBB4 475 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.88
SP140-201ENST00000343805 PAIP2BQ9ULR5 123 aaKnown RBP9.52□□□□□ -0.88
SP140-201ENST00000343805 COL1A1P02452 1464 aaPredicted RBP9.52□□□□□ -0.89
SP140-201ENST00000343805 ENC1O14682 589 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 MTRF1O75570 445 aaKnown RBP9.52□□□□□ -0.89
SP140-201ENST00000343805 CNGA1P29973 690 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 KRT9P35527 623 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 PSMC4P43686 418 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 RCN1Q15293 331 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 FAM98CQ17RN3 349 aaKnown RBP9.52□□□□□ -0.89
SP140-201ENST00000343805 APTXQ7Z2E3 356 aaKnown RBP9.52□□□□□ -0.89
SP140-201ENST00000343805 PGBD3Q8N328 593 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 SLC35F6Q8N357 371 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 MAML3Q96JK9 1138 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 IWS1Q96ST2 819 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 CHP1Q99653 195 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 CRNKL1Q9BZJ0 848 aaKnown RBP9.52□□□□□ -0.89
SP140-201ENST00000343805 KAT14Q9H8E8 782 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 GUCA1BQ9UMX6 200 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 FAM205AQ6ZU69 1335 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 FOSL1P15407 271 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 GJA5P36382 358 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 TCF7P36402 384 aaPredicted RBP9.52□□□□□ -0.89
SP140-201ENST00000343805 AARSP49588 968 aaKnown RBP eCLIP9.52□□□□□ -0.89
SP140-201ENST00000343805 UBE4AQ14139 1066 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 USH1GQ495M9 461 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 WDR75Q8IWA0 830 aaKnown RBP9.52□□□□□ -0.89
SP140-201ENST00000343805 PHTF2Q8N3S3 785 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 VPS37AQ8NEZ2 397 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 FERMT2Q96AC1 680 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 KIFC2Q96AC6 838 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 OSBPL10Q9BXB5 764 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 FAM204AQ9H8W3 233 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 L1RE1Q9UN81 338 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 COMMD10Q9Y6G5 202 aa9.52□□□□□ -0.89
SP140-201ENST00000343805 MYH6P13533 1939 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 CHD4Q14839 1912 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 A6NNZ2 444 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 POTEB2H3BUK9 544 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 KIAA0754O94854 1291 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 CCDC166P0CW27 439 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 PRCPP42785 496 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 OXCT1P55809 520 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 TUBB4BP68371 445 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 TUBB8Q3ZCM7 444 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 NCCRP1Q6ZVX7 275 aaPredicted RBP9.51□□□□□ -0.89
SP140-201ENST00000343805 LINC00116Q8NCU8 138 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 SPATA20Q8TB22 786 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms