RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 FAM167AQ96KS9 214 aa16.9■□□□□ 0.3
CARMIL3-201ENST00000342740 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
CARMIL3-201ENST00000342740 PSMD14O00487 310 aa16.89■□□□□ 0.3
CARMIL3-201ENST00000342740 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.3
CARMIL3-201ENST00000342740 IFRD2Q12894 506 aaPredicted RBP16.89■□□□□ 0.3
CARMIL3-201ENST00000342740 NEDD9Q14511 834 aa16.89■□□□□ 0.3
CARMIL3-201ENST00000342740 MGARPQ8TDB4 240 aa16.89■□□□□ 0.3
CARMIL3-201ENST00000342740 FAM193BQ96PV7 902 aaPredicted RBP16.89■□□□□ 0.3
CARMIL3-201ENST00000342740 RPF1Q9H9Y2 349 aaKnown RBP16.89■□□□□ 0.3
CARMIL3-201ENST00000342740 FER1L4A9Z1Z3 1794 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 DPYDQ12882 1025 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 PPP1R2P3Q6NXS1 205 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 DNAJC24Q6P3W2 148 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 TCP11Q8WWU5 503 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 FAM49AQ9H0Q0 323 aaPredicted RBP16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 VCPKMTQ9H867 229 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 HOMER3Q9NSC5 361 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 SYNJ2BP-COX16A0A087WUM0 186 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 GOLGA8KD6RF30 607 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 EYA4O95677 639 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 SARNPP82979 210 aaKnown RBP16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 SLC15A2Q16348 729 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 MAPK6Q16659 721 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 LPAR1Q92633 364 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 COX16Q9P0S2 106 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 ADGRG1Q9Y653 693 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 GBP1P32455 592 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 BBOF1Q8ND07 529 aa16.89■□□□□ 0.29
CARMIL3-201ENST00000342740 GRIN1Q05586 938 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 COL23A1Q86Y22 540 aaPredicted RBP16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 ADSSL1Q8N142 457 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 PCDHA10Q9Y5I2 948 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 H7C0C1 242 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 ATP5OP48047 213 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 EPHB4P54760 987 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 SGO2Q562F6 1265 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 ENGASEQ8NFI3 743 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 KIAA1586Q9HCI6 787 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 FAM114A2Q9NRY5 505 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 A0A1W2PQC6 194 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 WDR46O15213 610 aaKnown RBP16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 STX2P32856 288 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 GNGT1P63211 74 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 COG2Q14746 738 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 C3orf67Q6ZVT6 689 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 CEP57Q86XR8 500 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 FAM71BQ8TC56 605 aa16.88■□□□□ 0.29
CARMIL3-201ENST00000342740 ATP8B1O43520 1251 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 ABL1P00519 1130 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 PLTPP55058 493 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 LMNB2Q03252 620 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 STK4Q13043 487 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 FAM213AQ9BRX8 229 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 ZNF302Q9NR11 478 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 CD2APQ9Y5K6 639 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 RICTORQ6R327 1708 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 PDZD4Q76G19 769 aaPredicted RBP16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 RUNDC3BQ96NL0 473 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 A6NJR5 290 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 DPEP1P16444 411 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 HSPA6P17066 643 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 MAN1A1P33908 653 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 SNX1Q13596 522 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 ADGRA1Q86SQ6 560 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 VSIG1Q86XK7 387 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 RHOT2Q8IXI1 618 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 CCDC110Q8TBZ0 833 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 PSPC1Q8WXF1 523 aaKnown RBP16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 TMEM39BQ9GZU3 492 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 SNX25Q9H3E2 840 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 SCAF8Q9UPN6 1271 aaKnown RBP16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 MED7O43513 233 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 PHBP35232 272 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 APBA1Q02410 837 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 MYO1EQ12965 1108 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 KCTD16Q68DU8 428 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 C2orf69Q8N8R5 385 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 MAD2L2Q9UI95 211 aa16.87■□□□□ 0.29
CARMIL3-201ENST00000342740 RHOBTB3O94955 611 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 INPP5BP32019 993 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 GFPT1Q06210 699 aaPredicted RBP16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 NFIAQ12857 509 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 NME8Q8N427 588 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 C7orf25Q9BPX7 421 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 VAMP7P51809 220 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 GEN1Q17RS7 908 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 HAUS6Q7Z4H7 955 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 TUFT1Q9NNX1 390 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 TBX3O15119 743 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 BAATQ14032 418 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms