RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FANCGO15287 622 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 GRAPQ13588 217 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 SH3RF1Q7Z6J0 888 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 GRAPLQ8TC17 118 aaPredicted RBP13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 CASKIN2Q8WXE0 1202 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 MTRQ99707 1265 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.261e-8■■■■□ 20.9
SNRNP48-201ENST00000342415 REXO2Q9Y3B8 237 aaKnown RBP13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 PASKQ96RG2 1323 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 KCNJ1P48048 391 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 ZC2HC1CQ53FD0 456 aaPredicted RBP13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 ANKS1AQ92625 1134 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 HAUS2Q9NVX0 235 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 FAM237AA0A1B0GTK4 181 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 POLR2MP0CAP2 368 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 GALCP54803 685 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 GRB10Q13322 594 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 ZNF449Q6P9G9 518 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 PPP1R21Q6ZMI0 780 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 PROM2Q8N271 834 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 POMGNT1Q8WZA1 660 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 CD248Q9HCU0 757 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 IL17RBQ9NRM6 502 aa13.45□□□□□ -0.26
SNRNP48-201ENST00000342415 TRIM37O94972 964 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 MYBP10242 640 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 HNRNPH1P31943 449 aaKnown RBP13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 ERFP50548 548 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 CTAGE3PQ8IX95 158 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 HAUS1Q96CS2 278 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 HVCN1Q96D96 273 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 ATF2P15336 505 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 PDE6CP51160 858 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 MTM1Q13496 603 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 TMED2Q15363 201 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 MMGT1Q8N4V1 131 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 BANK1Q8NDB2 785 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 MCUR1Q96AQ8 359 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 EPN3Q9H201 632 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 DHX36Q9H2U1 1008 aaKnown RBP13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 PARP2Q9UGN5 583 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 AGLP35573 1532 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 H0Y3Z8 333 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 CCDC188H7C350 402 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 CHUKO15111 745 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 CYTH3O43739 400 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 SUN1O94901 812 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 FTLP02792 175 aaPredicted RBP13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 MAPK4P31152 587 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 FAM118BQ9BPY3 351 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 KLC4Q9NSK0 619 aa13.44□□□□□ -0.26
SNRNP48-201ENST00000342415 SYF2O95926 243 aaKnown RBP13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 GH2P01242 217 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 NEDD9Q14511 834 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 FBXO33Q7Z6M2 555 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 SRRM1Q8IYB3 904 aaKnown RBP13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 TTC16Q8NEE8 873 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 C1orf54Q8WWF1 131 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 DBR1Q9UK59 544 aaKnown RBP13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 CCDC160A6NGH7 325 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 HIP1RO75146 1068 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 ECEL1O95672 775 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 TAL1P17542 331 aaPredicted RBP13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 DYNLT1P63172 113 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 CREG2Q8IUH2 290 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 KIRREL3Q8IZU9 778 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 VPS52Q8N1B4 723 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 TTC7AQ9ULT0 858 aaPredicted RBP13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 PEAK1Q9H792 1746 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 SSU72P8A0A1W2PR75 194 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 PDHBP11177 359 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 BMP3P12645 472 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 MXI1P50539 228 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 MYO1EQ12965 1108 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 LIN9Q5TKA1 542 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 IRF2BP1Q8IU81 584 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 DYDC2Q96IM9 177 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 TLR10Q9BXR5 811 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
SNRNP48-201ENST00000342415 LRRC10BA6NIK2 292 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 HNRNPDLO14979 420 aaKnown RBP13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 SLURP2P0DP57 97 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 GPSM2P81274 684 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 TRADDQ15628 312 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 C6orf163Q5TEZ5 329 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms