RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FERP16591 822 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 ABCB4P21439 1286 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 TMEM143Q96AN5 459 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 GPRASP2Q96D09 838 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 KAZALD1Q96I82 304 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 SLC38A10Q9HBR0 1119 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 GOLGA6CA6NDK9 693 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 GOLGA6BA6NDN3 693 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 LARGE1O95461 756 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 GOLGA6DP0CG33 693 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 CCDC77Q9BR77 488 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
LIN54-201ENST00000340417 MOV10L1Q9BXT6 1211 aaKnown RBP13.93□□□□□ -0.18
LIN54-201ENST00000340417 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 GOLGA6AQ9NYA3 693 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 CTAGE9A4FU28 777 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 RNF219Q5W0B1 726 aaPredicted RBP13.93□□□□□ -0.18
LIN54-201ENST00000340417 DHTKD1Q96HY7 919 aaPredicted RBP13.93□□□□□ -0.18
LIN54-201ENST00000340417 NAP1L3Q99457 506 aaPredicted RBP13.93□□□□□ -0.18
LIN54-201ENST00000340417 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 EVI5O60447 810 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 C4orf50Q6ZRC1 276 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 P2RX5Q93086 422 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 ANAPC4Q9UJX5 808 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 STXBP3O00186 592 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 PRKCEQ02156 737 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 TYW1BQ6NUM6 668 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 C15orf52Q6ZUT6 534 aaKnown RBP13.93□□□□□ -0.18
LIN54-201ENST00000340417 NKX2-3Q8TAU0 364 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 CNOT6LQ96LI5 555 aaKnown RBP13.93□□□□□ -0.18
LIN54-201ENST00000340417 POLD4Q9HCU8 107 aa13.93□□□□□ -0.18
LIN54-201ENST00000340417 SFR1Q86XK3 245 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 GMCL1Q96IK5 515 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 EPSTI1Q96J88 318 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 TUFT1Q9NNX1 390 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 MAGEA1P43355 309 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 ASAP2O43150 1006 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 DGAT1O75907 488 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 SLFN14P0C7P3 912 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 OR1G1P47890 313 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 ALDH7A1P49419 539 aaKnown RBP13.92□□□□□ -0.18
LIN54-201ENST00000340417 APLP1P51693 650 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 FKBP3Q00688 224 aaKnown RBP13.92□□□□□ -0.18
LIN54-201ENST00000340417 SH3TC2Q8TF17 1288 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 AFG1LQ8WV93 481 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 RAD54LQ92698 747 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 EXOC4Q96A65 974 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 CAPZA3Q96KX2 299 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 NALCNQ8IZF0 1738 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 RFC5P40937 340 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 ZNF699Q32M78 642 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 DDX4Q9NQI0 724 aaKnown RBP13.92□□□□□ -0.18
LIN54-201ENST00000340417 RAB20Q9NX57 234 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 SEPT10Q9P0V9 454 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 KNDC1Q76NI1 1749 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 OR6B2Q6IFH4 312 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 ZNF365Q70YC5 407 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
LIN54-201ENST00000340417 GPR182O15218 404 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 CASP7P55210 303 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 CCDC63Q8NA47 563 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.91□□□□□ -0.18
LIN54-201ENST00000340417 MAGED2Q9UNF1 606 aaPredicted RBP13.91□□□□□ -0.18
LIN54-201ENST00000340417 BNIP3LO60238 219 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 COBLO75128 1261 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 CALCOCO2Q13137 446 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 MRIQ9BWK5 157 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 ABHD16BQ9H3Z7 469 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 ZNF569Q5MCW4 686 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 RUFY4Q6ZNE9 571 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 LRRC71Q8N4P6 559 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 RGL1Q9NZL6 768 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 VWA5AO00534 786 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 PRRG1O14668 218 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 SKIP12755 728 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
LIN54-201ENST00000340417 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
LIN54-201ENST00000340417 NUDT18Q6ZVK8 323 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 ENTPD7Q9NQZ7 604 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 NOC2LQ9Y3T9 749 aaKnown RBP13.91□□□□□ -0.18
LIN54-201ENST00000340417 SHMT1P34896 483 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 LINC00301Q8NCQ3 95 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 TMEM169Q96HH4 297 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 CLMNQ96JQ2 1002 aa13.91□□□□□ -0.18
LIN54-201ENST00000340417 COL3A1P02461 1466 aaPredicted RBP13.9□□□□□ -0.18
LIN54-201ENST00000340417 GRAMD1CQ8IYS0 662 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
LIN54-201ENST00000340417 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 KCNH7Q9NS40 1196 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 GOLGA8SH3BPF8 625 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 HIP1RO75146 1068 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 RPLP2P05387 115 aaKnown RBP13.9□□□□□ -0.18
LIN54-201ENST00000340417 KRT10P13645 584 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 CYP2C19P33261 490 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms