RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 TYW1BQ6NUM6 668 aa10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 SOCS4Q8WXH5 440 aa10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 GCNT4Q9P109 453 aa10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 CYP2B6P20813 491 aa10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 KNOP1Q1ED39 458 aaKnown RBP10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 SESTD1Q86VW0 696 aa10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 CACNA1SQ13698 1873 aa10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 ATP8B3O60423 1300 aa10.15□□□□□ -0.78
FNDC3B-201ENST00000336824 ATP2A1O14983 1001 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 KIAA0391O15091 583 aaKnown RBP10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 POLR2FP61218 127 aaKnown RBP10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 TRPM4Q8TD43 1214 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 WDR18Q9BV38 432 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 KCNH7Q9NS40 1196 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 RRN3P2A6NIE6 340 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 E9PMD0 336 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 RPLP2P05387 115 aaKnown RBP10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 FDPSP14324 419 aaKnown RBP10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 SFR1Q86XK3 245 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 XXYLT1Q8NBI6 393 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 SNX25Q9H3E2 840 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 CTTNBP2NLQ9P2B4 639 aa10.15□□□□□ -0.79
FNDC3B-201ENST00000336824 VWA5AO00534 786 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 MED7O43513 233 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 PPFIA1Q13136 1202 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 TOGARAM1Q9Y4F4 1720 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 TCHHQ07283 1943 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 TGFB3P10600 412 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 ZNF568Q3ZCX4 644 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 SHC4Q6S5L8 630 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 RNF180Q86T96 592 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 ZFPM1Q8IX07 1006 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 TRIM11Q96F44 468 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 TYW1Q9NV66 732 aaKnown RBP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 PCDHB4Q9Y5E5 795 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 ROBO3Q96MS0 1386 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 DENND3A2RUS2 1198 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 NKRFO15226 690 aaKnown RBP eCLIP10.14□□□□□ -0.791e-8■■■□□ 18.7
FNDC3B-201ENST00000336824 ASAP2O43150 1006 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 TUBBP07437 444 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 PCIF1Q9H4Z3 704 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 ANKEF1Q9NU02 776 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 UBE4BO95155 1302 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 RPA1P27694 616 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 PLCB3Q01970 1234 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 ZBTB33Q86T24 672 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 GUF1Q8N442 669 aaKnown RBP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 HBP1O60381 514 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 C6orf222P0C671 652 aaPredicted RBP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 TWF2Q6IBS0 349 aaKnown RBP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 CEP128Q6ZU80 1094 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 MYPNQ86TC9 1320 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 MYCP01106 439 aaPredicted RBP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 URGCPQ8TCY9 931 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 POLR3CQ9BUI4 534 aaPredicted RBP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 ASCC2Q9H1I8 757 aaPredicted RBP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 PXMP2Q9NR77 195 aa10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
FNDC3B-201ENST00000336824 YDJCA8MPS7 323 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 TCP11X2Q5H9J9 407 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 ELMSAN1Q6PJG2 1045 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 NAPGQ99747 312 aaPredicted RBP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 SFI1A8K8P3 1242 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 NFX1Q12986 1120 aaKnown RBP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 ZRSR2Q15696 482 aaKnown RBP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 GOLPH3LQ9H4A5 285 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 DAPK3O43293 454 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 KPNA6O60684 536 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 NR3C1P04150 777 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 NTRK3Q16288 839 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 Q4G0T1 1027 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 TTC16Q8NEE8 873 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 C7orf25Q9BPX7 421 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 ZDHHC9Q9Y397 364 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 NAV1Q8NEY1 1877 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 TJP1Q07157 1748 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 STK10O94804 968 aaKnown RBP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 GAS8O95995 478 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 ZNF280AP59817 542 aaPredicted RBP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 IER5Q5VY09 327 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 SND1Q7KZF4 910 aaKnown RBP eCLIP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 REM2Q8IYK8 340 aaPredicted RBP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 TAAR1Q96RJ0 339 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 WNK3Q9BYP7 1800 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 HIP1RO75146 1068 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 TATDN1Q6P1N9 297 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 CCDC26Q8TAB7 109 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 RGL1Q9NZL6 768 aa10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 N4BP2Q86UW6 1770 aaPredicted RBP10.13□□□□□ -0.79
FNDC3B-201ENST00000336824 ZNF541Q9H0D2 1346 aa10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 SLC26A2P50443 739 aa10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 FAM193AP78312 1265 aa10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 C11orf57Q6ZUT1 292 aaPredicted RBP10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 MAIP1Q8WWC4 291 aa10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 RANBP17Q9H2T7 1088 aaKnown RBP10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 C17orf75Q9HAS0 396 aa10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 ST7Q9NRC1 585 aa10.12□□□□□ -0.79
FNDC3B-201ENST00000336824 NDC80O14777 642 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms