RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 ITGA4P13612 1032 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 GALCP54803 685 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SGO2Q562F6 1265 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TSEN2Q8NCE0 465 aaKnown RBP10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PARVGQ9HBI0 331 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 METTL14Q9HCE5 456 aaKnown RBP10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ZBTB39O15060 712 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MMEP08473 750 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PSMC6P62333 389 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NFIAQ12857 509 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KCNB1Q14721 858 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TMED2Q15363 201 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ALS2CLQ60I27 953 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NLRP14Q86W24 1093 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CCDC197Q8NCU1 140 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 BTBD6Q96KE9 485 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ZMYND12Q9H0C1 365 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NARFQ9UHQ1 456 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ODF2LQ9ULJ1 636 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FLT1P17948 1338 aa10.63□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PPEF1O14829 653 aaPredicted RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ATP2A1O14983 1001 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SLC16A4O15374 487 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 UCHL3P15374 230 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KNOP1Q1ED39 458 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FBXO33Q7Z6M2 555 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SRRM1Q8IYB3 904 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KLHL29Q96CT2 875 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RSRC1Q96IZ7 334 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 REEP2Q9BRK0 252 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 DHX36Q9H2U1 1008 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ALG13Q9NP73 1137 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 OSGEPQ9NPF4 335 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MTMR4Q9NYA4 1195 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SWAP70Q9UH65 585 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PDS5AQ29RF7 1337 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CCDC160A6NGH7 325 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RASGRF2O14827 1237 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FERP16591 822 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 IRX4P78413 519 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PPP1R18Q6NYC8 613 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 WDR59Q6PJI9 974 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RFX8Q6ZV50 586 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KIFAP3Q92845 792 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 STMN4Q9H169 189 aaPredicted RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MAGEF1Q9HAY2 307 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PLAGL2Q9UPG8 496 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 REXO2Q9Y3B8 237 aaKnown RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 DAGLAQ9Y4D2 1042 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PVALEFA0A1B0GWK0 134 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RPS6KA4O75676 772 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 GAS8O95995 478 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MAPK4P31152 587 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 LSP1P33241 339 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 C10orf76Q5T2E6 689 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SCYL2Q6P3W7 929 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CD248Q9HCU0 757 aa10.62□□□□□ -0.71
CSGALNACT1-201ENST00000332246 PPP1R37O75864 691 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 APBA3O96018 575 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MYL1P05976 194 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MXI1P50539 228 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SLC18A3Q16572 532 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MMS22LQ6ZRQ5 1243 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TAOK1Q7L7X3 1001 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FMNL3Q8IVF7 1028 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NEK9Q8TD19 979 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 CASKIN2Q8WXE0 1202 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 N4BP2L2Q92802 583 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 TAF1DQ9H5J8 278 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SLC24A3Q9HC58 644 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ITIH6Q6UXX5 1313 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 F5H423 210 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 H0YIN7 160 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KCNA1Q09470 495 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SNCBQ16143 134 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SCARA5Q6ZMJ2 495 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 APBB1IPQ7Z5R6 666 aaPredicted RBP10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 USP37Q86T82 979 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 MSANTD4Q8NCY6 345 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ATP6V1G3Q96LB4 118 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 FAM167BQ9BTA0 163 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 JMJD4Q9H9V9 463 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SH3GLB2Q9NR46 395 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 HAUS2Q9NVX0 235 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 KBTBD4Q9NVX7 518 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 USP20Q9Y2K6 914 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 ABCB11O95342 1321 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 EVI5O60447 810 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 GUCY2CP25092 1073 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
CSGALNACT1-201ENST00000332246 RCSD1Q6JBY9 416 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms