RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GPRC5DQ9NZD1 345 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 CFBP00751 764 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 PAK2Q13177 524 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 PTGISQ16647 500 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 GLE1Q53GS7 698 aaKnown RBP18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 SLC30A10Q6XR72 485 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 CYP2W1Q8TAV3 490 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 TRIM9Q9C026 710 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 GDF3Q9NR23 364 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 GGA3Q9NZ52 723 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 SIK3Q9Y2K2 1263 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 MARCH6O60337 910 aa18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 LCA5LO95447 670 aa18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 LMNB1P20700 586 aa18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 GFPT1Q06210 699 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 VWA3BQ502W6 1294 aa18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 PIK3R5Q8WYR1 880 aa18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 NOX5Q96PH1 765 aa18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 CD248Q9HCU0 757 aa18.81■□□□□ 0.6
SCAMP4-201ENST00000316097 ERCC3P19447 782 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 NLRP14Q86W24 1093 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 MYCBPAPQ8TBZ2 947 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 IQCDQ96DY2 449 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 AGBL1Q96MI9 1066 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 CCT8L2Q96SF2 557 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 SYT17Q9BSW7 474 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 NDST4Q9H3R1 872 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 PPARDQ03181 441 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 MTMR2Q13614 643 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 SEMA6BQ9H3T3 888 aa18.8■□□□□ 0.6
SCAMP4-201ENST00000316097 PJA2O43164 708 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.63e-7■■□□□ 12
SCAMP4-201ENST00000316097 IFT88Q13099 833 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 SPP2Q13103 211 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 SEMA3FQ13275 785 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 ECM1Q16610 540 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 PRR16Q569H4 304 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 PPP4R3AQ6IN85 833 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 ATP6V1G3Q96LB4 118 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 WRNIP1Q96S55 665 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 PAGR1Q9BTK6 254 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 SLC39A2Q9NP94 309 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 STAT3P40763 770 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 MDH1P40925 334 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 ARHGAP4P98171 946 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 TDRD12Q587J7 1177 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 MAATS1Q7Z4T9 603 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 YTHDF3Q7Z739 585 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 CPXCR1Q8N123 301 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 KIAA0895Q8NCT3 520 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 CASKIN2Q8WXE0 1202 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 KRT12Q99456 494 aa18.79■□□□□ 0.6
SCAMP4-201ENST00000316097 SPDYE3A6NKU9 549 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 E7EVH7 732 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 FAM86B1E9PN63 330 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 FAM86B2P0C5J1 330 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 HPDP32754 393 aaPredicted RBP18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 TRADDQ15628 312 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 GPC2Q8N158 579 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 CHURC1Q8WUH1 139 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 RNF181Q9P0P0 153 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 CTNND1O60716 968 aaKnown RBP18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 RNASE9P60153 205 aaKnown RBP18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 GRB10Q13322 594 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 AK8Q96MA6 479 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 CENPHQ9H3R5 247 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 PCDHA12Q9UN75 941 aa18.78■□□□□ 0.6
SCAMP4-201ENST00000316097 FTCDO95954 541 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 CEP85LQ5SZL2 805 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 CACNA2D4Q7Z3S7 1137 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 KCNK18Q7Z418 384 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 CD302Q8IX05 232 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 MREGQ8N565 214 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 PNMA5Q96PV4 448 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 CUEDC2Q9H467 287 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 TSKSQ9UJT2 592 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 MYH7BA7E2Y1 1941 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 CCDC172P0C7W6 258 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 ACTN3Q08043 901 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 TEX2Q8IWB9 1127 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 CCDC13Q8IYE1 715 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 BAP1Q92560 729 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 C7orf25Q9BPX7 421 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 RANBP17Q9H2T7 1088 aaKnown RBP18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 MAGEF1Q9HAY2 307 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 PPANQ9NQ55 473 aaKnown RBP18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 HOMER2Q9NSB8 354 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 EMILIN3Q9NT22 766 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 SYNPO2Q9UMS6 1093 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 PLAAQ9Y263 795 aa18.77■□□□□ 0.6
SCAMP4-201ENST00000316097 PPP1R2P41236 205 aa18.77■□□□□ 0.59
SCAMP4-201ENST00000316097 FXR2P51116 673 aaKnown RBP eCLIP18.77■□□□□ 0.59
SCAMP4-201ENST00000316097 ITGB3BPQ13352 177 aaPredicted RBP18.77■□□□□ 0.59
SCAMP4-201ENST00000316097 MAN2A1Q16706 1144 aa18.77■□□□□ 0.59
SCAMP4-201ENST00000316097 CCDC40Q4G0X9 1142 aa18.77■□□□□ 0.59
SCAMP4-201ENST00000316097 EMC10Q5UCC4 262 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms