RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 RAD54LQ92698 747 aa17.53■□□□□ 0.4
TUBA3E-201ENST00000312988 BHMT2Q9H2M3 363 aa17.53■□□□□ 0.4
TUBA3E-201ENST00000312988 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
TUBA3E-201ENST00000312988 STK17AQ9UEE5 414 aa17.53■□□□□ 0.4
TUBA3E-201ENST00000312988 HPSEQ9Y251 543 aa17.53■□□□□ 0.4
TUBA3E-201ENST00000312988 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
TUBA3E-201ENST00000312988 C17orf102A2RUQ5 167 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 EYA4O95677 639 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 PLA2G4BP0C869 781 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 MNX1P50219 401 aaPredicted RBP17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 GRIK4Q16099 956 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 CEP57L1Q8IYX8 460 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 PAWRQ96IZ0 340 aaKnown RBP17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 NIFKQ9BYG3 293 aaKnown RBP17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 CYP26B1Q9NR63 512 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 SETD4Q9NVD3 440 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 HDAC6Q9UBN7 1215 aa17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 DBR1Q9UK59 544 aaKnown RBP17.52■□□□□ 0.4
TUBA3E-201ENST00000312988 FAM237AA0A1B0GTK4 181 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 LIG1P18858 919 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 RARRES1P49788 294 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 ATN1P54259 1190 aaPredicted RBP17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 FAM160A1Q05DH4 1040 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 MCM6Q14566 821 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 NFRKBQ6P4R8 1299 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 TRAPPC12Q8WVT3 735 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 BLOC1S4Q9NUP1 217 aa17.52■□□□□ 0.39
TUBA3E-201ENST00000312988 NRCAMQ92823 1304 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 KAT6AQ92794 2004 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 COL1A2P08123 1366 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 RRN3P2A6NIE6 340 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 GNAT1P11488 350 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 SOX10P56693 466 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 TBC1D8BQ0IIM8 1120 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 SV2BQ7L1I2 683 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 NECAB2Q7Z6G3 386 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 LRRC15Q8TF66 581 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 CUEDC2Q9H467 287 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 BMP2KQ9NSY1 1161 aaPredicted RBP17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 USP25Q9UHP3 1055 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 SERTAD1Q9UHV2 236 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 GRIN2DO15399 1336 aa17.51■□□□□ 0.39
TUBA3E-201ENST00000312988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 ARVCFO00192 962 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 USO1O60763 962 aaKnown RBP17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 ZNF202O95125 648 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 POLGP54098 1239 aaPredicted RBP17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 E2F4Q16254 413 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 NAALADL2Q58DX5 795 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 PADI6Q6TGC4 694 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 GPBP1Q86WP2 473 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 LMBR1Q8WVP7 490 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 GTF2IRD1Q9UHL9 959 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 NOD1Q9Y239 953 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 PPME1Q9Y570 386 aa17.5■□□□□ 0.39
TUBA3E-201ENST00000312988 ZBTB42B2RXF5 422 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 NR1I2O75469 434 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 KRT18P05783 430 aaKnown RBP17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 COL6A1P12109 1028 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 KLRC1P26715 233 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 RFC5P40937 340 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 PTPN11Q06124 597 aaPredicted RBP17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 TARBP2Q15633 366 aaKnown RBP17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 LONRF3Q496Y0 759 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 SESTD1Q86VW0 696 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 FMR1NBQ8N0W7 255 aaPredicted RBP17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 SYT2Q8N9I0 419 aaPredicted RBP17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 CNNM3Q8NE01 707 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 SLC7A3Q8WY07 619 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 CCDC34Q96HJ3 373 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 SEZ6LQ9BYH1 1024 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 MAGEF1Q9HAY2 307 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 TUBE1Q9UJT0 475 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 LOXHD1Q8IVV2 1947 aa17.49■□□□□ 0.39
TUBA3E-201ENST00000312988 MAGEB2O15479 319 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 ACTN4O43707 911 aaKnown RBP17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 PTMSP20962 102 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 SLC12A3P55017 1021 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 ZNF200P98182 395 aaPredicted RBP17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 GDF6Q6KF10 455 aaPredicted RBP17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 SLC39A5Q6ZMH5 540 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 EXOC8Q8IYI6 725 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 METTL13Q8N6R0 699 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 RETREG2Q8NC44 543 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 STAMQ92783 540 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 ZBTB10Q96DT7 871 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 JPH2Q9BR39 696 aaPredicted RBP17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 ATP6V0A4Q9HBG4 840 aa17.48■□□□□ 0.39
TUBA3E-201ENST00000312988 DGAT1O75907 488 aa17.47■□□□□ 0.39
TUBA3E-201ENST00000312988 C22orf31O95567 290 aa17.47■□□□□ 0.39
TUBA3E-201ENST00000312988 AFMP43652 599 aa17.47■□□□□ 0.39
TUBA3E-201ENST00000312988 AMPD3Q01432 767 aa17.47■□□□□ 0.39
TUBA3E-201ENST00000312988 SNW1Q13573 536 aaKnown RBP17.47■□□□□ 0.39
TUBA3E-201ENST00000312988 EMC2Q15006 297 aa17.47■□□□□ 0.39
TUBA3E-201ENST00000312988 PTGISQ16647 500 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms