RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 PDGFCQ9NRA1 345 aa12.27□□□□□ -0.44
TRIM59-201ENST00000309784 TNPO2O14787 897 aaKnown RBP12.27□□□□□ -0.45
TRIM59-201ENST00000309784 CALUO43852 315 aaPredicted RBP12.27□□□□□ -0.45
TRIM59-201ENST00000309784 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
TRIM59-201ENST00000309784 CYP2J2P51589 502 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 STAT5BP51692 787 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 CASP5P51878 434 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 ADKP55263 362 aaKnown RBP12.27□□□□□ -0.45
TRIM59-201ENST00000309784 SOX10P56693 466 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 IGBP1P78318 339 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 C4orf19Q8IY42 314 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 SEPT1Q8WYJ6 367 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 DRC1Q96MC2 740 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 ZFYVE28Q9HCC9 887 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 IGF2BP3O00425 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRIM59-201ENST00000309784 SUPT20HL2P0C7V6 817 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 ZNF18P17022 549 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 LRRC63Q05C16 580 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 CYP4F22Q6NT55 531 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 C1orf186Q6ZWK4 172 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 TRIM50Q86XT4 487 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 SHCBP1Q8NEM2 672 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 CACTINQ8WUQ7 758 aaKnown RBP12.27□□□□□ -0.45
TRIM59-201ENST00000309784 SLC7A3Q8WY07 619 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 IFT74Q96LB3 600 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 NRBP2Q9NSY0 501 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 ASTN1O14525 1302 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 FRMPD4Q14CM0 1322 aa12.27□□□□□ -0.45
TRIM59-201ENST00000309784 WDR90Q96KV7 1748 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 SLC16A4O15374 487 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 MUTP22033 750 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 EEF1GP26641 437 aaKnown RBP12.26□□□□□ -0.45
TRIM59-201ENST00000309784 DMP1Q13316 513 aaPredicted RBP12.26□□□□□ -0.45
TRIM59-201ENST00000309784 FAM110CQ1W6H9 321 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 CCDC150Q8NCX0 1101 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 SCFD2Q8WU76 684 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 SCFD1Q8WVM8 642 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 STRNO43815 780 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
TRIM59-201ENST00000309784 MAPK4P31152 587 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 VSTM4Q8IW00 320 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 KCTD17Q8N5Z5 321 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 RDM1Q8NG50 284 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 SREBF2Q12772 1141 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 KNOP1Q1ED39 458 aaKnown RBP12.26□□□□□ -0.45
TRIM59-201ENST00000309784 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 TRMT1Q9NXH9 659 aaKnown RBP12.26□□□□□ -0.45
TRIM59-201ENST00000309784 ODF2LQ9ULJ1 636 aa12.26□□□□□ -0.45
TRIM59-201ENST00000309784 XKR3Q5GH77 459 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 CDKAL1Q5VV42 579 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 METTL7BQ6UX53 244 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 GPIHBP1Q8IV16 184 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 METTL13Q8N6R0 699 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 SCLT1Q96NL6 688 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
TRIM59-201ENST00000309784 IMPACTQ9P2X3 320 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 LRRIQ4A6NIV6 560 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 TMEM88BA6NKF7 163 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 KCNA1Q09470 495 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 CENPPQ6IPU0 288 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 KCNV1Q6PIU1 500 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 SENP7Q9BQF6 1050 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 KIFC3Q9BVG8 833 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 PCIF1Q9H4Z3 704 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 KMT5AQ9NQR1 393 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.25□□□□□ -0.45
TRIM59-201ENST00000309784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM59-201ENST00000309784 NFASCO94856 1347 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 EXOC3O60645 756 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 TGFB3P10600 412 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 ANO5Q75V66 913 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 LRRC8AQ8IWT6 810 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 ATP6V0A4Q9HBG4 840 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 KCND2Q9NZV8 630 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 PAPPA2Q9BXP8 1791 aa12.25□□□□□ -0.45
TRIM59-201ENST00000309784 ZNF862O60290 1169 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 FARP2O94887 1054 aaPredicted RBP12.24□□□□□ -0.45
TRIM59-201ENST00000309784 ARIH2O95376 493 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 EPB41P11171 864 aaKnown RBP12.24□□□□□ -0.45
TRIM59-201ENST00000309784 ADCYAP1R1P41586 468 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 HSDL1Q3SXM5 330 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 TMEM143Q96AN5 459 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 GBP3Q9H0R5 595 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 ANKEF1Q9NU02 776 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 SLC45A1Q9Y2W3 748 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.24□□□□□ -0.458e-11■□□□□ 10.3
TRIM59-201ENST00000309784 A0A1B0GTH6 734 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
TRIM59-201ENST00000309784 CRACR2AQ9BSW2 395 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 CYP26B1Q9NR63 512 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 SEL1LQ9UBV2 794 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 DBR1Q9UK59 544 aaKnown RBP12.24□□□□□ -0.45
TRIM59-201ENST00000309784 PYCARDQ9ULZ3 195 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 PTPRFP10586 1907 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 OATP04181 439 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 CNGA1P29973 690 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 B3GNT9Q6UX72 402 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 ABHD15Q6UXT9 468 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms