RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ACSL3O95573 720 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 GABPB1Q06547 395 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-201ENST00000275233 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
SHPRH-201ENST00000275233 CYFIP1Q7L576 1253 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 MAML1Q92585 1016 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 SPZ1Q9BXG8 430 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 hCG_1984214I3L0E3 225 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 KRT10P13645 584 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 ZNF713Q8N859 430 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-201ENST00000275233 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 USH1CQ9Y6N9 552 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 EXOC1LA0A1B0GW35 172 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
SHPRH-201ENST00000275233 KCNA4P22459 653 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 MMP19Q99542 508 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 IFNAR1P17181 557 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 GCLMP48507 274 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 SWSAP1Q6NVH7 229 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 TCP11Q8WWU5 503 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
SHPRH-201ENST00000275233 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
SHPRH-201ENST00000275233 DCAF4Q8WV16 495 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 SARS2Q9NP81 518 aaKnown RBP12.76□□□□□ -0.37
SHPRH-201ENST00000275233 ANLNQ9NQW6 1124 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 CACNB2Q08289 660 aaPredicted RBP12.76□□□□□ -0.37
SHPRH-201ENST00000275233 SPP2Q13103 211 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 SFR1Q86XK3 245 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 ELMOD1Q8N336 334 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
SHPRH-201ENST00000275233 KRT82Q9NSB4 513 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 FAM8A1Q9UBU6 413 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 E9PMD0 336 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 CCNE1P24864 410 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 PRELPP51888 382 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 DR1Q01658 176 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 ZNF699Q32M78 642 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 CDC25BP30305 580 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 NME3Q13232 169 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 CCDC197Q8NCU1 140 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
SHPRH-201ENST00000275233 PIK3R2O00459 728 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 TRPA1O75762 1119 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 GPSM2P81274 684 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 KIF19Q2TAC6 998 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 LCA5Q86VQ0 697 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 MB21D1Q8N884 522 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 TMEM47Q9BQJ4 181 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 Q9H521 79 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 SUCLA2Q9P2R7 463 aaPredicted RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ADAMTS1Q9UHI8 967 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 RPS6KA4O75676 772 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 CIITAP33076 1130 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 GPC3P51654 580 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 EN1Q05925 392 aaPredicted RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 RESTQ13127 1097 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 PSMD2Q13200 908 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ART3Q13508 389 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 SURF1Q15526 300 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 FRA10AC1Q70Z53 315 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 STRBPQ96SI9 672 aaKnown RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ZNF302Q9NR11 478 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ANAPC7Q9UJX3 599 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 DNAJC12Q9UKB3 198 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 JRKLQ9Y4A0 524 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ZBTB5O15062 677 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ACCSLQ4AC99 568 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 RSBN1LQ6PCB5 846 aaPredicted RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.75□□□□□ -0.376e-6■■■■■ 38.2
SHPRH-201ENST00000275233 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 NEMP1O14524 444 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 HDLBPQ00341 1268 aaKnown RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 KRT31Q15323 416 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 SLFN12LQ6IEE8 588 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 TMEM270Q6UE05 265 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 TDRD7Q8NHU6 1098 aaKnown RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 FAM81BQ96LP2 452 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 NOVA2Q9UNW9 492 aaKnown RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ORC6Q9Y5N6 252 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 MAPK6Q16659 721 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 IFT43Q96FT9 208 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 CD209Q9NNX6 404 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 KLHL8Q9P2G9 620 aaPredicted RBP12.75□□□□□ -0.37
SHPRH-201ENST00000275233 KDM5CP41229 1560 aa12.75□□□□□ -0.37
SHPRH-201ENST00000275233 ADORA2BP29275 332 aa12.74□□□□□ -0.37
SHPRH-201ENST00000275233 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
SHPRH-201ENST00000275233 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
SHPRH-201ENST00000275233 EPS15L1Q9UBC2 864 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms