RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 KRT31Q15323 416 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CDHR1Q96JP9 859 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 KIF9Q9HAQ2 790 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 SENP1Q9P0U3 644 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 KIF17Q9P2E2 1029 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 LRRN2O75325 713 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 IL10P22301 178 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 DAB2P98082 770 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 MIS18BP1Q6P0N0 1132 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 SIX6OS1Q8N1H7 587 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 TGS1Q96RS0 853 aaKnown RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 FAM167BQ9BTA0 163 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 LRRC4Q9HBW1 653 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CYP26B1Q9NR63 512 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 ZNF229Q9UJW7 825 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CCNL1Q9UK58 526 aaPredicted RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 GGPS1O95749 300 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 FAM47EQ6ZV65 393 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 WWP1Q9H0M0 922 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 SNX24Q9Y343 169 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 ACTN3Q08043 901 aaPredicted RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 TCP10Q12799 353 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 ZNF577Q9BSK1 485 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 CCDC90BQ9GZT6 254 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 GPATCH8Q9UKJ3 1502 aaKnown RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 LAMC3Q9Y6N6 1575 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 IFNAR1P17181 557 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 RESTQ13127 1097 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 SLC30A9Q6PML9 568 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 USP44Q9H0E7 712 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 SMYD3Q9H7B4 428 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 COPRSQ9NQ92 184 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 PKD2L2Q9NZM6 624 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 CDV3Q9UKY7 258 aaKnown RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 STRIP2Q9ULQ0 834 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 H0YIN7 160 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 SNX2O60749 519 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 DNAJC6O75061 913 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 LRRC41Q15345 812 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 MFSD14BQ5SR56 506 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 THAP11Q96EK4 314 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 HMGB3O15347 200 aaKnown RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 ASAP2O43150 1006 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 SEMA3FQ13275 785 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 CUL3Q13618 768 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 TBCCQ15814 346 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 AGGF1Q8N302 714 aaeCLIP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 OSBPL5Q9H0X9 879 aaPredicted RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 PARVGQ9HBI0 331 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 ATP10DQ9P241 1426 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 ANP32DO95626 131 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 PCCAP05165 728 aaPredicted RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 HLA-DPA1P20036 260 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 CYP27A1Q02318 531 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 PROM2Q8N271 834 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 SNX19Q92543 992 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 ATP11BQ9Y2G3 1177 aa9.31□□□□□ -0.92
SCUBE3-201ENST00000274938 EIF3DO15371 548 aaKnown RBP eCLIP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 HNRNPRO43390 633 aaKnown RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 PALMO75781 387 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 CEBPAP49715 358 aaPredicted RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 USP14P54578 494 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 GRIN1Q05586 938 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 SLFN12LQ6IEE8 588 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 SMYD4Q8IYR2 804 aaPredicted RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 RNF217Q8TC41 542 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 MAGEB5Q9BZ81 275 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 LGALS16A8MUM7 142 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 GOLGA8HP0CJ92 632 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 BRAFP15056 766 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 SMARCA1P28370 1054 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 EPHB1P54762 984 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 ERICH1Q86X53 443 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 PBXIP1Q96AQ6 731 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 VIPAS39Q9H9C1 493 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 OLA1Q9NTK5 396 aaKnown RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 MRGBPQ9NV56 204 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 DDX5P17844 614 aaKnown RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 INPP5AQ14642 412 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 DNAL1Q4LDG9 190 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 RYBPQ8N488 228 aaPredicted RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 EDC3Q96F86 508 aaKnown RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 KIF22Q14807 665 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 TTLL11Q8NHH1 800 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 CDC26Q8NHZ8 85 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 LZICQ8WZA0 190 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 DIABLOQ9NR28 239 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 IRAK4Q9NWZ3 460 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 GTSE1Q9NYZ3 720 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 CSADQ9Y600 493 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms