RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CTTNBP2Q8WZ74 1663 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 UBE4BO95155 1302 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 ARL4CP56559 192 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 AARS2Q5JTZ9 985 aaKnown RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 PHF21AQ96BD5 680 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 GGT7Q9UJ14 662 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 PTPREP23469 700 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 MTRQ99707 1265 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 UBE2TQ9NPD8 197 aaPredicted RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 MEFVO15553 781 aaPredicted RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 DDHD2O94830 711 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 SERPINB4P48594 390 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 KRT33BQ14525 404 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 ZNF532Q9HCE3 1301 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 PDIK1LQ8N165 341 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 TLR3O15455 904 aaKnown RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 CYP4A11Q02928 519 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 ZNF280DQ6N043 979 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 C11orf74Q86VG3 221 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 PANX2Q96RD6 677 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 RUBCNLQ9H714 662 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 ALG13Q9NP73 1137 aaKnown RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 FBXO9Q9UK97 447 aaPredicted RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 SOX13Q9UN79 622 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 SNX24Q9Y343 169 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 PALMO75781 387 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 GALNT4Q8N4A0 578 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 RETREG2Q8NC44 543 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 PI4K2BQ8TCG2 481 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 H0YCG3 227 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 IFNA8P32881 189 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 POLGP54098 1239 aaPredicted RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 TEKT4Q8WW24 435 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 CNBD2Q96M20 576 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 LRRC14Q15048 493 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 SCARA5Q6ZMJ2 495 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 BBS5Q8N3I7 341 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 LSG1Q9H089 658 aaKnown RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 NR1H3Q13133 447 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 AGR3Q8TD06 166 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 RBM17Q96I25 401 aaKnown RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 PSTPIP2Q9H939 334 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 PRG4Q92954 1404 aaPredicted RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 NFIBO00712 420 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 NR2F2P24468 414 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 COPS2P61201 443 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 THRAP3Q9Y2W1 955 aaKnown RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 ARL4AP40617 200 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 PTGDRQ13258 359 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 IYDQ6PHW0 289 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 DRP2Q13474 957 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 VPS11Q9H270 941 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 IVNS1ABPQ9Y6Y0 642 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 M0R3G1 203 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 INPP5AQ14642 412 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 PRPF18Q99633 342 aaKnown RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 RABL2AQ9UBK7 228 aaPredicted RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 PDE5AO76074 875 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 TMCC1O94876 653 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 KDSRQ06136 332 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 LRRC41Q15345 812 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 FAM26FQ5R3K3 315 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 ARHGAP17Q68EM7 881 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 VSTM4Q8IW00 320 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 DDIASQ8IXT1 998 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 EYA3Q99504 573 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 BBS2Q9BXC9 721 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 TMEM245Q9H330 911 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 GMEB1Q9Y692 573 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 SERPING1P05155 500 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 ATP6V1B1P15313 513 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 PSMA2P25787 234 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 ARFIP2P53365 341 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 APOA5Q6Q788 366 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 CCDC149Q6ZUS6 474 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 GINS4Q9BRT9 223 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 SLC13A1Q9BZW2 595 aa11.91□□□□□ -0.5
CHFR-201ENST00000266880 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.91□□□□□ -0.5
CHFR-201ENST00000266880 ITGA6P23229 1130 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 PSMC6P62333 389 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 ARHGAP22Q7Z5H3 698 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 GSNP06396 782 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 RWDD4Q6NW29 188 aaKnown RBP11.9□□□□□ -0.5
CHFR-201ENST00000266880 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
CHFR-201ENST00000266880 ZNF212Q9UDV6 495 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms