RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 EIF3DO15371 548 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 OFD1O75665 1012 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 TBC1D8BQ0IIM8 1120 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 TRIM14Q14142 442 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 CCDC40Q4G0X9 1142 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 VWA3BQ502W6 1294 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 XKR9Q5GH70 373 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 DAW1Q8N136 415 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 FIZ1Q96SL8 496 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 BAG1Q99933 345 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 TRAF3IP3Q9Y228 551 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 DNAJC25-GNG10A0A024R161 153 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 PDXKO00764 312 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 CALUO43852 315 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 DKC1O60832 514 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 KCNJ6P48051 423 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 FXR1P51114 621 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 NPEPPSP55786 919 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 KCNA1Q09470 495 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ADAM9Q13443 819 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 SWSAP1Q6NVH7 229 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 MIS18BP1Q6P0N0 1132 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ABHD15Q6UXT9 468 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ANO5Q75V66 913 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 EEPD1Q7L9B9 569 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 CNGA4Q8IV77 575 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 CCDC60Q8IWA6 550 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ZC3H3Q8IXZ2 948 aaKnown RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 GPRC5AQ8NFJ5 357 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 FGD4Q96M96 766 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 PORCNQ9H237 461 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
SCAF11-201ENST00000266589 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
SCAF11-201ENST00000266589 TRPM7Q96QT4 1865 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 ZMYM2Q9UBW7 1377 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 USP27XA6NNY8 438 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 ZNF862O60290 1169 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 GNA14O95837 355 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 SUPT20HL2P0C7V6 817 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 ZBTB48P10074 688 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-201ENST00000266589 UBA1P22314 1058 aaKnown RBP12.75□□□□□ -0.37
SCAF11-201ENST00000266589 NR2F2P24468 414 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 STXBP4Q6ZWJ1 553 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 ZNF720Q7Z2F6 126 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 NDST4Q9H3R1 872 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 MYH9P35579 1960 aaKnown RBP12.75□□□□□ -0.37
SCAF11-201ENST00000266589 UBE4BO95155 1302 aa12.75□□□□□ -0.37
SCAF11-201ENST00000266589 CETN3O15182 167 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 STX10O60499 249 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 CCNA1P78396 465 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 PRKCEQ02156 737 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 SYCP1Q15431 976 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 CST9Q5W186 159 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 E4F1Q66K89 784 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-201ENST00000266589 OTUD6AQ7L8S5 288 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 KSR1Q8IVT5 923 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 CCAR2Q8N163 923 aaKnown RBP12.74□□□□□ -0.37
SCAF11-201ENST00000266589 DRC1Q96MC2 740 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 TIPINQ9BVW5 301 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
SCAF11-201ENST00000266589 LARSQ9P2J5 1176 aaKnown RBP12.74□□□□□ -0.37
SCAF11-201ENST00000266589 IGSF9BQ9UPX0 1349 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 PLXNA1Q9UIW2 1896 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 K7ENM7 598 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 ARHGAP6O43182 974 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 STBD1O95210 358 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 NR3C1P04150 777 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 CEP170P1Q96L14 293 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-201ENST00000266589 ERGIC2Q96RQ1 377 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 MCM3APO60318 1980 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
SCAF11-201ENST00000266589 RNF225M0QZC1 329 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 FARP2O94887 1054 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 TGFB3P10600 412 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 PLS3P13797 630 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 GCLCP48506 637 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 KLK7P49862 253 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 MARSP56192 900 aaKnown RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 NEDD9Q14511 834 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 IKZF4Q9H2S9 585 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms