RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 GID8Q9NWU2 228 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 DDX25Q9UHL0 483 aaKnown RBP11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 PNMA3Q9UL41 463 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 MED23Q9ULK4 1368 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 PER1O15534 1290 aaPredicted RBP11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 HSPD1P10809 573 aaKnown RBP11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 FAM160B1Q5W0V3 765 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 BTNL9Q6UXG8 535 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 CATSPER3Q86XQ3 398 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 NLGN1Q8N2Q7 840 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 SEC16BQ96JE7 1060 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 BPIFA3Q9BQP9 254 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 HDAC6Q9UBN7 1215 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 PDE5AO76074 875 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 PSMC2P35998 433 aaKnown RBP11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 HSPA9P38646 679 aaKnown RBP11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 HIC1Q14526 733 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 NCLNQ969V3 563 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 UBN1Q9NPG3 1134 aa11.51□□□□□ -0.57
SLC6A4-201ENST00000261707 SERPINB2P05120 415 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 SPATA5Q8NB90 893 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 ADA2Q9NZK5 511 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 FBXO2Q9UK22 296 aaPredicted RBP11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 GAS7O60861 476 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 KRT37O76014 449 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 LIG4P49917 911 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 GALNT17Q6IS24 598 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 NFRKBQ6P4R8 1299 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 OLFML3Q9NRN5 406 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 HLA-DPA1P20036 260 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 PTPREP23469 700 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 ANXA13P27216 316 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 IDI1Q13907 227 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 AOC3Q16853 763 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 ODR4Q5SWX8 454 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 PCDHB4Q9Y5E5 795 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 TLR3O15455 904 aaKnown RBP11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 LRRN2O75325 713 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 LRRC41Q15345 812 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 LARP4BQ92615 738 aaKnown RBP11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 CASP10Q92851 521 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 PAGE5Q96GU1 130 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 NT5C1BQ96P26 610 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 KCNF1Q9H3M0 494 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 NOD2Q9HC29 1040 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 GCNT4Q9P109 453 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 MAGED2Q9UNF1 606 aaPredicted RBP11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 H0Y626 953 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 TRIM16O95361 564 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 KIF23Q02241 960 aaPredicted RBP11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 APOA5Q6Q788 366 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 ATP6V0A1Q93050 837 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 CCDC127Q96BQ5 260 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 MMTAG2Q9BU76 263 aaKnown RBP11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 FAM8A1Q9UBU6 413 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 BNIP3LO60238 219 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 GRIN3BO60391 1043 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 TNNC2P02585 160 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 TFAP4Q01664 338 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 PDIK1LQ8N165 341 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 SPON1Q9HCB6 807 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 SEPT3Q9UH03 358 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 KCNG1Q9UIX4 513 aa11.5□□□□□ -0.57
SLC6A4-201ENST00000261707 NESP48681 1621 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 LAD1O00515 517 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 SEMA3EO15041 775 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 CCDC22O60826 627 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 THOC5Q13769 683 aaKnown RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 MFSD14CQ5VZR4 134 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 MAP4K1Q92918 833 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 KLC2Q9H0B6 622 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 SUGCTQ9HAC7 445 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 PDP2Q9P2J9 529 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 FBXL5Q9UKA1 691 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 DOLKQ9UPQ8 538 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 CAV1Q03135 178 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 LRRC36Q1X8D7 754 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 MYLK4Q86YV6 388 aaPredicted RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 KCTD6Q8NC69 237 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 HPCAL4Q9UM19 191 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 LRRIQ3A6PVS8 624 aaPredicted RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 NBPF26B4DH59 902 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 SERPINB1P30740 379 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 YWHAHQ04917 246 aaPredicted RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 DNAAF3Q8N9W5 541 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 PLBD2Q8NHP8 589 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 NAF1Q96HR8 494 aaKnown RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 HIC2Q96JB3 615 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 BTBD6Q96KE9 485 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 TTC25Q96NG3 672 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms