RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 PCDHA5Q9Y5H7 936 aa11.48□□□□□ -0.57
PUM1-201ENST00000257075 STXBP3O00186 592 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 KRIT1O00522 736 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 CYBBP04839 570 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 EVCP57679 992 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 CEP55Q53EZ4 464 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
PUM1-201ENST00000257075 XXYLT1Q8NBI6 393 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 PPP2R3BQ9Y5P8 575 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 GLI2P10070 1586 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 PNPLA6Q8IY17 1366 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 MED14O60244 1454 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 MCF2LO15068 1137 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 MOCS3O95396 460 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 NR3C2P08235 984 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 COPB1P53618 953 aaKnown RBP11.47□□□□□ -0.57
PUM1-201ENST00000257075 ACCSLQ4AC99 568 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 RNF149Q8NC42 400 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 KCTD6Q8NC69 237 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 ATP6V1E2Q96A05 226 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 XPO4Q9C0E2 1151 aaKnown RBP11.47□□□□□ -0.57
PUM1-201ENST00000257075 MTMR4Q9NYA4 1195 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 NEDD4P46934 1319 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 RGS12O14924 1447 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 RALAP11233 206 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 ADKP55263 362 aaKnown RBP11.47□□□□□ -0.57
PUM1-201ENST00000257075 TOGARAM2Q6ZUX3 1019 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
PUM1-201ENST00000257075 KIF12Q96FN5 646 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 ERO1AQ96HE7 468 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 SUCLA2Q9P2R7 463 aaPredicted RBP11.47□□□□□ -0.57
PUM1-201ENST00000257075 FAM8A1Q9UBU6 413 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 RCAN1P53805 252 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 CYP27A1Q02318 531 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 ARHGEF18Q6ZSZ5 1173 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 FAM213AQ9BRX8 229 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 SRPRBQ9Y5M8 271 aaKnown RBP11.47□□□□□ -0.57
PUM1-201ENST00000257075 PNPLA7Q6ZV29 1317 aa11.47□□□□□ -0.57
PUM1-201ENST00000257075 POTEB3A0JP26 581 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 PRRG1O14668 218 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 USP11P51784 963 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 IQCB1Q15051 598 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 POTEBQ6S5H4 581 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 PCSK9Q8NBP7 692 aaKnown RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 ACAP3Q96P50 834 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 LXNQ9BS40 222 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 MMTAG2Q9BU76 263 aaKnown RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 FHDC1Q9C0D6 1143 aaPredicted RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 NGRNQ9NPE2 291 aaKnown RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 TYW1Q9NV66 732 aaKnown RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 ZKSCAN5Q9Y2L8 839 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 BUB1O43683 1085 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 CYP2C9P11712 490 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 ORC2Q13416 577 aaPredicted RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 TADA2BQ86TJ2 420 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 MTMR3Q13615 1198 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 THOC5Q13769 683 aaKnown RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 ZNF394Q53GI3 561 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 XKR3Q5GH77 459 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 BTBD8Q5XKL5 378 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 DDX50Q9BQ39 737 aaKnown RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 FANCLQ9NW38 375 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 LSM7Q9UK45 103 aaKnown RBP11.46□□□□□ -0.57
PUM1-201ENST00000257075 PCDHB6Q9Y5E3 794 aa11.46□□□□□ -0.57
PUM1-201ENST00000257075 IQGAP3Q86VI3 1631 aa11.46□□□□□ -0.58
PUM1-201ENST00000257075 SGK1O00141 431 aa11.46□□□□□ -0.58
PUM1-201ENST00000257075 APOEP02649 317 aa11.46□□□□□ -0.58
PUM1-201ENST00000257075 KRT1P04264 644 aa11.46□□□□□ -0.58
PUM1-201ENST00000257075 ATF2P15336 505 aa11.46□□□□□ -0.58
PUM1-201ENST00000257075 BFSP2Q13515 415 aa11.46□□□□□ -0.58
PUM1-201ENST00000257075 PTPROQ16827 1216 aa11.46□□□□□ -0.58
PUM1-201ENST00000257075 ZKSCAN4Q969J2 545 aaPredicted RBP11.46□□□□□ -0.58
PUM1-201ENST00000257075 POTEMA6NI47 508 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 CCNE1P24864 410 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 LAMC2Q13753 1193 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 EPHA7Q15375 998 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 RAB44Q7Z6P3 723 aaPredicted RBP11.45□□□□□ -0.58
PUM1-201ENST00000257075 EPSTI1Q96J88 318 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 BARHL2Q9NY43 387 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 EHD2Q9NZN4 543 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 PCDHB7Q9Y5E2 793 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 RRN3P2A6NIE6 340 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 A8MXQ7 604 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 HPDP32754 393 aaPredicted RBP11.45□□□□□ -0.58
PUM1-201ENST00000257075 GTF2F1P35269 517 aaKnown RBP eCLIP11.45□□□□□ -0.582e-9■■■■□ 22.9
PUM1-201ENST00000257075 YWHAGP61981 247 aaKnown RBP eCLIP11.45□□□□□ -0.58
PUM1-201ENST00000257075 STAP1Q9ULZ2 295 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 CLTCL1P53675 1640 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 CLGNO14967 610 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 SUPT20HL2P0C7V6 817 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 CXCL9Q07325 125 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
PUM1-201ENST00000257075 DENND2CQ68D51 928 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 HDAC11Q96DB2 347 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 TMEM260Q9NX78 707 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 ATP11BQ9Y2G3 1177 aa11.45□□□□□ -0.58
PUM1-201ENST00000257075 HYOU1Q9Y4L1 999 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms