RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
COL21A1-201ENST00000244728 DNAJC7Q99615 494 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 FERMT1Q9BQL6 677 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 PCDHA6Q9UN73 950 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 PCDHA8Q9Y5H6 950 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 BZW2Q9Y6E2 419 aaKnown RBP10.04□□□□□ -0.8
COL21A1-201ENST00000244728 DIP2BQ9P265 1576 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 HIP1RO75146 1068 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 RHOBTB3O94955 611 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 Q3C1V9 767 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 EARS2Q5JPH6 523 aaKnown RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 LIN9Q5TKA1 542 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 HDAC7Q8WUI4 952 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 CNOT10Q9H9A5 744 aaKnown RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 RAVER2Q9HCJ3 691 aaKnown RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 CEP72Q9P209 647 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 INO80B-WBP1J3KQ70 363 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 GBP1P32455 592 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 HDLBPQ00341 1268 aaKnown RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 ADCY1Q08828 1119 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 DMP1Q13316 513 aaPredicted RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 PPP1R21Q6ZMI0 780 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 NEK9Q8TD19 979 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 INO80BQ9C086 356 aaPredicted RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 METTL14Q9HCE5 456 aaKnown RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 BARHL2Q9NY43 387 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 PARP2Q9UGN5 583 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 FBXL5Q9UKA1 691 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 PTPN22Q9Y2R2 807 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 SUN1O94901 812 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 FGGP02679 453 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 MMEP08473 750 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 ARHGAP4P98171 946 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 DALRD3Q5D0E6 543 aaKnown RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 GIMAP8Q8ND71 665 aaPredicted RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 SLC24A3Q9HC58 644 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 CD248Q9HCU0 757 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 SYF2O95926 243 aaKnown RBP10.03□□□□□ -0.8
COL21A1-201ENST00000244728 ASNSP08243 561 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 MARK3P27448 753 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 TMOD1P28289 359 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 C6orf163Q5TEZ5 329 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 PDXDC1Q6P996 788 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 NACC1Q96RE7 527 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 APOL6Q9BWW8 343 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 HAUS2Q9NVX0 235 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 ZHX2Q9Y6X8 837 aa10.03□□□□□ -0.8
COL21A1-201ENST00000244728 CCDC188H7C350 402 aa10.02□□□□□ -0.8
COL21A1-201ENST00000244728 ADRA2BP18089 450 aa10.02□□□□□ -0.8
COL21A1-201ENST00000244728 RASA3Q14644 834 aa10.02□□□□□ -0.8
COL21A1-201ENST00000244728 GRM4Q14833 912 aa10.02□□□□□ -0.8
COL21A1-201ENST00000244728 C3orf67Q6ZVT6 689 aa10.02□□□□□ -0.8
COL21A1-201ENST00000244728 CCSER1Q9C0I3 900 aa10.02□□□□□ -0.8
COL21A1-201ENST00000244728 FAM53CQ9NYF3 392 aa10.02□□□□□ -0.8
COL21A1-201ENST00000244728 CPSF2Q9P2I0 782 aaKnown RBP10.02□□□□□ -0.8
COL21A1-201ENST00000244728 AGLP35573 1532 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 DAPK3O43293 454 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 AFPP02771 609 aaKnown RBP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 AARSP49588 968 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 ZNF131P52739 623 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 BSPRYQ5W0U4 402 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 ARHGEF2Q92974 986 aaKnown RBP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 IWS1Q96ST2 819 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 SH3GLB2Q9NR46 395 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 C1orf112Q9NSG2 853 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 AMACRQ9UHK6 382 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 SNX24Q9Y343 169 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 ORC4O43929 436 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 ATF7P17544 494 aaPredicted RBP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 CNGA1P29973 690 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 ARL1P40616 181 aaPredicted RBP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 PEX3P56589 373 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 MXRA7P84157 204 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 PTGISQ16647 500 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 SESTD1Q86VW0 696 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 DDX42Q86XP3 938 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 RUBCNQ92622 972 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 ZMYND12Q9H0C1 365 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 PARVGQ9HBI0 331 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 GEMIN8Q9NWZ8 242 aaKnown RBP10.02□□□□□ -0.81
COL21A1-201ENST00000244728 GCNT4Q9P109 453 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 TTLL3Q9Y4R7 772 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 JCADQ9P266 1359 aa10.02□□□□□ -0.81
COL21A1-201ENST00000244728 PMS1P54277 932 aaKnown RBP10.01□□□□□ -0.81
COL21A1-201ENST00000244728 DR1Q01658 176 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 MYO1EQ12965 1108 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 VPS72Q15906 364 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 TSNAXIP1Q2TAA8 658 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 SCYL2Q6P3W7 929 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 FBXO33Q7Z6M2 555 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 SFR1Q86XK3 245 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 SLC7A3Q8WY07 619 aa10.01□□□□□ -0.81
COL21A1-201ENST00000244728 RNF34Q969K3 372 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms