RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 MARSP56192 900 aaKnown RBP16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 GABPAQ06546 454 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 PEX26Q7Z412 305 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 CD302Q8IX05 232 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 U2AF1L4Q8WU68 220 aaKnown RBP16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 ATP2C2O75185 946 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 GNA14O95837 355 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 IBSPP21815 317 aaPredicted RBP16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 GIT2Q14161 759 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 QRICH1Q2TAL8 776 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 DAAM2Q86T65 1068 aa16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
PCDHB8-201ENST00000239444 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 AFPP02771 609 aaKnown RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 MYZAPP0CAP1 466 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 ZBTB48P10074 688 aaPredicted RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 ABCB4P21439 1286 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 CACNB3P54284 484 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 ODF2Q5BJF6 829 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 ANO3Q9BYT9 981 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 NOVA2Q9UNW9 492 aaKnown RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 KDM3AQ9Y4C1 1321 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 IGKV6D-41A0A0C4DH26 115 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 GOLGA6L10A6NI86 522 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 PGRMC1O00264 195 aaKnown RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 DDX3XO00571 662 aaKnown RBP eCLIP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 XRCC5P13010 732 aaKnown RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 PRPF4BQ13523 1007 aaKnown RBP16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 HYIQ5T013 277 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 ZFPM1Q8IX07 1006 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 CYP2W1Q8TAV3 490 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 PLCB1Q9NQ66 1216 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 GCNT4Q9P109 453 aa16.77■□□□□ 0.28
PCDHB8-201ENST00000239444 SMCHD1A6NHR9 2005 aa16.77■□□□□ 0.27
PCDHB8-201ENST00000239444 SHMT1P34896 483 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 USH1GQ495M9 461 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 SUGP1Q8IWZ8 645 aaKnown RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 CYFIP2Q96F07 1278 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 IGSF9BQ9UPX0 1349 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 SEPT2Q15019 361 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 KNOP1Q1ED39 458 aaKnown RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 CNPY4Q8N129 248 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 KCNMB3Q9NPA1 279 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 GCNT3O95395 438 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 NFIAQ12857 509 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 ZNF211Q13398 564 aaPredicted RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 EPHA7Q15375 998 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 GLYCTKQ8IVS8 523 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 PRPF38AQ8NAV1 312 aaKnown RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 MDM1Q8TC05 714 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 MYCBPQ99417 103 aaPredicted RBP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 NCAPGQ9BPX3 1015 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 RUSC1Q9BVN2 902 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 BHMT2Q9H2M3 363 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 CD248Q9HCU0 757 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 PCDHAC2Q9Y5I4 1007 aa16.76■□□□□ 0.27
PCDHB8-201ENST00000239444 ANKRD31Q8N7Z5 1873 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 ZBTB39O15060 712 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 FAM107AO95990 144 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 SPATA31C1P0DKV0 1188 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 EDRF1Q3B7T1 1238 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 UBAP2Q5T6F2 1119 aaKnown RBP16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 AADACL2Q6P093 401 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 CERS5Q8N5B7 392 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 ACTRT1Q8TDG2 376 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 RGL1Q9NZL6 768 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 SLC12A6Q9UHW9 1150 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 ASTN1O14525 1302 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 FGGP02679 453 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 NR3C1P04150 777 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 GALCP54803 685 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 MAGOHP61326 146 aaKnown RBP16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 DHX9Q08211 1270 aaKnown RBP16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 SPIRE1Q08AE8 756 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 COG2Q14746 738 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 PIGOQ8TEQ8 1089 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 MAGOHBQ96A72 148 aaKnown RBP16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 CHORDC1Q9UHD1 332 aaPredicted RBP16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 ATP8A1Q9Y2Q0 1164 aa16.75■□□□□ 0.27
PCDHB8-201ENST00000239444 ATAD5Q96QE3 1844 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 FRMD3A2A2Y4 597 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 FAM86B1E9PN63 330 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 TRIM37O94972 964 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms