RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 INPP4AQ96PE3 977 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 NACC1Q96RE7 527 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 SENP7Q9BQF6 1050 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 TSEN34Q9BSV6 310 aaKnown RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 TIPINQ9BVW5 301 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 UPF3AQ9H1J1 476 aaKnown RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 PDLIM7Q9NR12 457 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 KCNH7Q9NS40 1196 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 CYP39A1Q9NYL5 469 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 KIAA1024Q9UPX6 916 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 NFASCO94856 1347 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-201ENST00000238688 LRRC10BA6NIK2 292 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 PLA2G4BP0C869 781 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 PTGS1P23219 599 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 ITGB8P26012 769 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 EEF1GP26641 437 aaKnown RBP14.65□□□□□ -0.06
SLIRP-201ENST00000238688 CST5P28325 142 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-201ENST00000238688 NKX3-2P78367 333 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 FANCCQ00597 558 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 TLE2Q04725 743 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 LRRC63Q05C16 580 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 PDE4DQ08499 809 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 TPD52L1Q16890 204 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-201ENST00000238688 CDKAL1Q5VV42 579 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 NSMFQ6X4W1 530 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 CATSPER3Q86XQ3 398 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 SMAP1Q8IYB5 467 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-201ENST00000238688 EIF2AK1Q9BQI3 630 aaKnown RBP14.65□□□□□ -0.06
SLIRP-201ENST00000238688 HSD3B7Q9H2F3 369 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 BLZF1Q9H2G9 400 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 THAP9Q9H5L6 903 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 AGO4Q9HCK5 861 aaKnown RBP14.65□□□□□ -0.06
SLIRP-201ENST00000238688 COL20A1Q9P218 1284 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 SEL1LQ9UBV2 794 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 ZKSCAN5Q9Y2L8 839 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 MYH11P35749 1972 aa14.65□□□□□ -0.06
SLIRP-201ENST00000238688 MYMKA6NI61 221 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 ESPNB1AK53 854 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 SERPINC1P01008 464 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 P4HBP07237 508 aaKnown RBP14.64□□□□□ -0.07
SLIRP-201ENST00000238688 NR3C2P08235 984 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 SPATA31C1P0DKV0 1188 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 GAP43P17677 238 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 ITGB5P18084 799 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 CDK11BP21127 795 aaKnown RBP14.64□□□□□ -0.07
SLIRP-201ENST00000238688 CCNE1P24864 410 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 MSNP26038 577 aaKnown RBP14.64□□□□□ -0.07
SLIRP-201ENST00000238688 ACLYP53396 1101 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 SLC12A3P55017 1021 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 UBASH3AP57075 661 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 GJA9P57773 515 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 BAATQ14032 418 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-201ENST00000238688 MCM6Q14566 821 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 KCNA10Q16322 511 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 FILIP1LQ4L180 1135 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 TMEM63BQ5T3F8 832 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 ZNF746Q6NUN9 644 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-201ENST00000238688 SLC30A10Q6XR72 485 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 MORC4Q8TE76 937 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 DDX12PQ92771 950 aa14.64□□□□□ -0.07
SLIRP-201ENST00000238688 GNEQ9Y223 722 aaKnown RBP14.64□□□□□ -0.07
SLIRP-201ENST00000238688 MYH9P35579 1960 aaKnown RBP14.64□□□□□ -0.07
SLIRP-201ENST00000238688 POTEB3A0JP26 581 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 WDR64B1ANS9 1081 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 AP5Z1O43299 807 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 MED24O75448 989 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 EIF3JO75822 258 aaKnown RBP14.63□□□□□ -0.07
SLIRP-201ENST00000238688 ICAM3P32942 547 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 PRCPP42785 496 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 MRPS9P82933 396 aaKnown RBP14.63□□□□□ -0.07
SLIRP-201ENST00000238688 ISM2Q6H9L7 571 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 TAPT1Q6NXT6 567 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 KCNV1Q6PIU1 500 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 POTEBQ6S5H4 581 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 DRC7Q8IY82 874 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 CCDC150Q8NCX0 1101 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 SLC17A8Q8NDX2 589 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 CYP2W1Q8TAV3 490 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 LRRC15Q8TF66 581 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 NELFBQ8WX92 580 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 DNAJC19Q96DA6 116 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 IQCDQ96DY2 449 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 TAAR1Q96RJ0 339 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 ZSWIM4Q9H7M6 989 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 PDGFCQ9NRA1 345 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 FANCLQ9NW38 375 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 DBR1Q9UK59 544 aaKnown RBP14.63□□□□□ -0.07
SLIRP-201ENST00000238688 ODF2LQ9ULJ1 636 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 UBE4BO95155 1302 aa14.63□□□□□ -0.07
SLIRP-201ENST00000238688 LAMA2P24043 3122 aaKnown RBP14.62□□□□□ -0.07
SLIRP-201ENST00000238688 MOXD2PA6NHM9 499 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 TPM2P07951 284 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 TGFB3P10600 412 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 CYP11B2P19099 503 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 SCP2P22307 547 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 CDK7P50613 346 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 STXBP2Q15833 593 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms