RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TMEM266Q2M3C6 531 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 GDF6Q6KF10 455 aaPredicted RBP12.68□□□□□ -0.38
SF3B6-201ENST00000233468 TAF2Q6P1X5 1199 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 RSPH3Q86UC2 560 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 ATP8B4Q8TF62 1192 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 PPP1R13LQ8WUF5 828 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
SF3B6-201ENST00000233468 VWCEQ96DN2 955 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 UIMC1Q96RL1 719 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 RAB34Q9BZG1 259 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 UNC45AQ9H3U1 944 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 GABBR1Q9UBS5 961 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 MAFBQ9Y5Q3 323 aaPredicted RBP12.68□□□□□ -0.38
SF3B6-201ENST00000233468 TRIP12Q14669 1992 aaPredicted RBP12.68□□□□□ -0.38
SF3B6-201ENST00000233468 KIF28PB7ZC32 967 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 GTPBP6O43824 516 aaPredicted RBP12.67□□□□□ -0.38
SF3B6-201ENST00000233468 CAND2O75155 1236 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 BMP15O95972 392 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 OR52Z1P0C646 297 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 SYT1P21579 422 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 TXKP42681 527 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 ADGRE1Q14246 886 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 PLCB4Q15147 1175 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 EPHA7Q15375 998 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 ZNF174Q15697 407 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 CCDC85BQ15834 202 aaPredicted RBP12.67□□□□□ -0.38
SF3B6-201ENST00000233468 GRIK4Q16099 956 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 ZNF484Q5JVG2 852 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 OTOP2Q7RTS6 562 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
SF3B6-201ENST00000233468 RPUSD2Q8IZ73 545 aaKnown RBP12.67□□□□□ -0.38
SF3B6-201ENST00000233468 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 HAS1Q92839 578 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 PCYT2Q99447 389 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 WNT8AQ9H1J5 351 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 NKX2-4Q9H2Z4 354 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 RNPEPQ9H4A4 650 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 ZSCAN16Q9H4T2 348 aaPredicted RBP12.67□□□□□ -0.38
SF3B6-201ENST00000233468 IL23AQ9NPF7 189 aa12.67□□□□□ -0.38
SF3B6-201ENST00000233468 YBX2Q9Y2T7 364 aaKnown RBP12.67□□□□□ -0.38
SF3B6-201ENST00000233468 STX6O43752 255 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 FGBP02675 491 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
SF3B6-201ENST00000233468 CYP2C9P11712 490 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 INSRRP14616 1297 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 MYOGP15173 224 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 HOXC8P31273 242 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 RFC2P35250 354 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 RABGGTBP53611 331 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 PSMC5P62195 406 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 LCE2DQ5TA82 110 aaPredicted RBP12.66□□□□□ -0.38
SF3B6-201ENST00000233468 NCAPH2Q6IBW4 605 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 B3GNT9Q6UX72 402 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 EXOC8Q8IYI6 725 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 TET1Q8NFU7 2136 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 ERMNQ8TAM6 284 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 HERVK_113Q902F9 699 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 SCLYQ96I15 445 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 MTMR9Q96QG7 549 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
SF3B6-201ENST00000233468 TTC12Q9H892 705 aaPredicted RBP12.66□□□□□ -0.38
SF3B6-201ENST00000233468 SETD4Q9NVD3 440 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 VAV3Q9UKW4 847 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 TELO2Q9Y4R8 837 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 COL1A2P08123 1366 aa12.66□□□□□ -0.38
SF3B6-201ENST00000233468 IGSF9BQ9UPX0 1349 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 OATP04181 439 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 PFKMP08237 780 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.38
SF3B6-201ENST00000233468 XKR3Q5GH77 459 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 PSRC1Q6PGN9 363 aaPredicted RBP12.65□□□□□ -0.38
SF3B6-201ENST00000233468 OTUD6AQ7L8S5 288 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 SERINC5Q86VE9 423 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 LMBR1Q8WVP7 490 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 GJA10Q969M2 543 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 GAS2L1Q99501 681 aaPredicted RBP12.65□□□□□ -0.38
SF3B6-201ENST00000233468 JPH2Q9BR39 696 aaPredicted RBP12.65□□□□□ -0.38
SF3B6-201ENST00000233468 ZSWIM4Q9H7M6 989 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 PPME1Q9Y570 386 aa12.65□□□□□ -0.38
SF3B6-201ENST00000233468 BDP1A6H8Y1 2624 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 SCN10AQ9Y5Y9 1956 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 MAGEB2O15479 319 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 TREHO43280 583 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 SELPP16109 830 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 IGFBP4P22692 258 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 TMOD1P28289 359 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 PRPHP41219 470 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 IGBP1P78318 339 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 RBL2Q08999 1139 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 HAUS3Q68CZ6 603 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 DTHD1Q6ZMT9 781 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 NME8Q8N427 588 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 MTIF3Q9H2K0 278 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms