RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 UBA5Q9GZZ9 404 aa6.53□□□□□ -1.36
AFP-201ENST00000226359 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
AFP-201ENST00000226359 VAT1LQ9HCJ6 419 aa6.53□□□□□ -1.36
AFP-201ENST00000226359 GPAMQ9HCL2 828 aa6.53□□□□□ -1.36
AFP-201ENST00000226359 PRDM5Q9NQX1 630 aaPredicted RBP6.53□□□□□ -1.36
AFP-201ENST00000226359 MYH4Q9Y623 1939 aa6.53□□□□□ -1.36
AFP-201ENST00000226359 ZNF536O15090 1300 aa6.53□□□□□ -1.36
AFP-201ENST00000226359 LAMA4Q16363 1823 aa6.52□□□□□ -1.36
AFP-201ENST00000226359 DCDC2CA8MYV0 355 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 KLRF2D3W0D1 207 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 NKRFO15226 690 aaKnown RBP eCLIP6.52□□□□□ -1.371e-23■□□□□ 10.1
AFP-201ENST00000226359 PGK1P00558 417 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 ZNF865P0CJ78 1059 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 COL6A1P12109 1028 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 HSD3B2P26439 372 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 ADCYAP1R1P41586 468 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 ALDH5A1P51649 535 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 CNTN2Q02246 1040 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 GRM4Q14833 912 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 MUM1L1Q5H9M0 696 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 HABP4Q5JVS0 413 aaKnown RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 CREB3L3Q68CJ9 461 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 RASGRP2Q7LDG7 609 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 FRMD6Q96NE9 622 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 SEZ6LQ9BYH1 1024 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 STARD7Q9NQZ5 370 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 PHF24Q9UPV7 400 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 PDE4DIPQ5VU43 2346 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 SYNRGQ9UMZ2 1314 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 A0A0U1RQG5 324 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 NFIBO00712 420 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 SLC27A2O14975 620 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 SNAI1O95863 264 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 TAL1P17542 331 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 CST5P28325 142 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 CPT1AP50416 773 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 RPS6P62753 249 aaKnown RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 SERINC3Q13530 473 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 PPP2R5BQ15173 497 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 LRRC26Q2I0M4 334 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 QRICH1Q2TAL8 776 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 ARHGEF16Q5VV41 709 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 IQSEC1Q6DN90 963 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 SLC30A10Q6XR72 485 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 CYB5R4Q7L1T6 521 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 TLK2Q86UE8 772 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 HOMER1Q86YM7 354 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 TREML1Q86YW5 311 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 FBXO16Q8IX29 292 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 SAMD3Q8N6K7 520 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 FERMT2Q96AC1 680 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 RRP36Q96EU6 259 aaKnown RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 MAP3K14Q99558 947 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 UBE2OQ9C0C9 1292 aaKnown RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 LSG1Q9H089 658 aaKnown RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 EHMT1Q9H9B1 1298 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 TIMMDC1Q9NPL8 285 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 FOXD3Q9UJU5 478 aaPredicted RBP6.52□□□□□ -1.37
AFP-201ENST00000226359 SLC12A7Q9Y666 1083 aa6.52□□□□□ -1.37
AFP-201ENST00000226359 A0A1W2PQ45 241 aaPredicted RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 A0A1W2PQY0 241 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 GCOM1H8Y6P7 765 aaPredicted RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 ZBTB5O15062 677 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 MAN1A2O60476 641 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 CPNE3O75131 537 aaKnown RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 POLR2MP0CAP2 368 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 SYN1P17600 705 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 GJA9P57773 515 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 TTLL4Q14679 1199 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 SEC23AQ15436 765 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 SLC39A5Q6ZMH5 540 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 CKAP2LQ8IYA6 745 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 MB21D2Q8IYB1 491 aaPredicted RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 OR6J1Q8NGC5 347 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 NSUN6Q8TEA1 469 aaKnown RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 SCFD2Q8WU76 684 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 IWS1Q96ST2 819 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 UPF3AQ9H1J1 476 aaKnown RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 IL25Q9H293 177 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 RBM28Q9NW13 759 aaKnown RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 MAP3K20Q9NYL2 800 aaKnown RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 NAP1L2Q9ULW6 460 aaPredicted RBP6.51□□□□□ -1.37
AFP-201ENST00000226359 Q9Y3F1 56 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 PCDHA1Q9Y5I3 950 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 MRVI1Q9Y6F6 885 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 ELP1O95163 1332 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 RLFQ13129 1914 aa6.51□□□□□ -1.37
AFP-201ENST00000226359 SH2B2O14492 632 aaPredicted RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 KPNA6O60684 536 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 PQBP1O60828 265 aaKnown RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 CFBP00751 764 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 PSMA5P28066 241 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 MAGEA10P43363 369 aaPredicted RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 ACLYP53396 1101 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 BECN1Q14457 450 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 STXBP2Q15833 593 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 KCNA10Q16322 511 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 FSCN1Q16658 493 aaKnown RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 TRIM60Q495X7 471 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms