RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 TMEM119Q4V9L6 283 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 ODR4Q5SWX8 454 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 TBC1D22AQ8WUA7 517 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 CSRNP1Q96S65 589 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 NT5C3AQ9H0P0 336 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 SNX24Q9Y343 169 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 IRS2Q9Y4H2 1338 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 A0A1W2PQJ5 194 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 IFNAR2P48551 515 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 MNAT1P51948 309 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 NAB2Q15742 525 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 MGARPQ8TDB4 240 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 KAT5Q92993 513 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 SELENOSQ9BQE4 189 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 EIF2AK1Q9BQI3 630 aaKnown RBP16.45■□□□□ 0.22
EFNB1-201ENST00000204961 FBXL5Q9UKA1 691 aa16.45■□□□□ 0.22
EFNB1-201ENST00000204961 NOC2LQ9Y3T9 749 aaKnown RBP16.45■□□□□ 0.22
EFNB1-201ENST00000204961 A0A1W2PRG0 241 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 TARSL2A2RTX5 802 aaKnown RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 MMP10P09238 476 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 EPB41P11171 864 aaKnown RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 HOXD13P35453 343 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 GALCP54803 685 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 PLTPP55058 493 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 PPFIA1Q13136 1202 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 PAK2Q13177 524 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 TRIP13Q15645 432 aaPredicted RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 KRT71Q3SY84 523 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 NAGPAQ9UK23 515 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 H2AFZP0C0S5 128 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 IL1R1P14778 569 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 GCLMP48507 274 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 SOX10P56693 466 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 UBAP2Q5T6F2 1119 aaKnown RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 DAB2IPQ5VWQ8 1189 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 H2AFVQ71UI9 128 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 MRRFQ96E11 262 aaKnown RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 PLCH1Q4KWH8 1693 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 EVI5O60447 810 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 BBOX1O75936 387 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 NR1D1P20393 614 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 KCNJ1P48048 391 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 MESDQ14696 234 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 DRAP1Q14919 205 aaPredicted RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 ASTE1Q2TB18 679 aaPredicted RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 FAM186BQ8IYM0 893 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 KIFC3Q9BVG8 833 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 AMNQ9BXJ7 453 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 GLIS2Q9BZE0 524 aaPredicted RBP16.44■□□□□ 0.22
EFNB1-201ENST00000204961 KCTD10Q9H3F6 313 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 DNAJC12Q9UKB3 198 aa16.44■□□□□ 0.22
EFNB1-201ENST00000204961 KIAA0754O94854 1291 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 ERLIN2O94905 339 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 KIF4AO95239 1232 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 TUBBP07437 444 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 INPP5BP32019 993 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 ZFYVE27Q5T4F4 411 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 LRCH2Q5VUJ6 765 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 OTUD6BQ8N6M0 293 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 SLC20A1Q8WUM9 679 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 LRP5O75197 1615 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 TNNC1P63316 161 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 DLG4P78352 724 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 SNX1Q13596 522 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 CBWD6Q4V339 395 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 ZCWPW2Q504Y3 356 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 CBWD3Q5JTY5 395 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 CBWD5Q5RIA9 395 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 GPATCH4Q5T3I0 446 aaKnown RBP16.43■□□□□ 0.22
EFNB1-201ENST00000204961 GBP6Q6ZN66 633 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 ERMNQ8TAM6 284 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 PPP1R9AQ9ULJ8 1098 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 IGSF9BQ9UPX0 1349 aa16.43■□□□□ 0.22
EFNB1-201ENST00000204961 TOM1O60784 492 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
EFNB1-201ENST00000204961 GABPAQ06546 454 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 FAM178BQ8IXR5 827 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 TAB3Q8N5C8 712 aaPredicted RBP16.42■□□□□ 0.22
EFNB1-201ENST00000204961 ARHGEF26Q96DR7 871 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 PRMT6Q96LA8 375 aaPredicted RBP16.42■□□□□ 0.22
EFNB1-201ENST00000204961 CTTNBP2NLQ9P2B4 639 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 ABCB11O95342 1321 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 MARCKSL1P49006 195 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 SLC12A3P55017 1021 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
EFNB1-201ENST00000204961 USP38Q8NB14 1042 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 LRRC27Q9C0I9 530 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 GPRC5CQ9NQ84 441 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 PPP1R1BQ9UD71 204 aaPredicted RBP16.42■□□□□ 0.22
EFNB1-201ENST00000204961 DDX3XO00571 662 aaKnown RBP eCLIP16.42■□□□□ 0.228e-7■■■■■ 50.7
EFNB1-201ENST00000204961 GAS7O60861 476 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 AARSP49588 968 aaKnown RBP eCLIP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms