RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Atp2b1G5E829 1220 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 AurkbO70126 345 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Tnfaip8l3Q3TBL6 204 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Znf865Q3U3I9 1058 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Exoc3Q6KAR6 755 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Pi4kbQ8BKC8 816 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Stoml1Q8CI66 399 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Vopp1Q8R1C3 172 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Dhx30Q99PU8 1217 aaKnown RBP20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Sh3bgrQ9WUZ7 214 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Large1Q9Z1M7 756 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Nup210lQ9D2F7 1881 aa20.83■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Fzd1O70421 642 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Glud1P26443 558 aaKnown RBP20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 B230104I21RikQ3USW4 141 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Adamts18Q4VC17 1219 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Rsad1Q5SUV1 442 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 F13a1Q8BH61 732 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Emc2Q9CRD2 297 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 TtpalQ9D3D0 343 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 TnmdQ9EP64 317 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Fut2Q9JL27 347 aa20.82■□□□□ 0.92
Scn1b-203ENSMUST00000211945 CiitaP79621 1155 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Slc7a1Q09143 622 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Mkrn3Q60764 544 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Caps2Q8BUG5 550 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Rpap2Q8VC34 614 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Nrbp1Q99J45 535 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Git2Q9JLQ2 708 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Prl2c5Q9JLV9 222 aa20.81■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Dock3Q8CIQ7 2027 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Cdc27A2A6Q5 825 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Trim12cD3Z3L3 497 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Gm8882E9Q7E4 283 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Orc4O88708 433 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Tal1P22091 329 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Fgfr4Q03142 799 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Nfe2Q07279 373 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Sema5bQ60519 1093 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Tcf12Q61286 706 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Acot5Q6Q2Z6 421 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Mamdc2Q8CG85 686 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Kiaa0391Q8JZY4 584 aaKnown RBP20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Olfr397Q8VEZ6 315 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Olfr1494Q8VGP8 315 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Pstpip2Q99M15 334 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Spock2Q9ER58 423 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 PorcnQ9JJJ7 461 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Fbxo16Q9QZM9 334 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Arid3bQ9Z1N7 568 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Kif26aQ52KG5 1881 aa20.8■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Gm45194A0A140LJG2 572 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Gm7168A0AUV4 508 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Rnf19bA2A7Q9 732 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Bpifb4A2BGH0 617 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Gm4788E9Q8B5 879 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Kcnb1Q03717 857 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Samd11Q1RNF8 542 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Zbed4Q80WQ9 1168 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Q8C5S3 137 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Apol10aQ8CCA5 318 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Adgrg2Q8CJ12 1009 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Ushbp1Q8R370 680 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Tmx1Q8VBT0 278 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Rtfdc1Q99K95 307 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 RnmtQ9D0L8 465 aaKnown RBP20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Dclk1Q9JLM8 756 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Galk1Q9R0N0 392 aa20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Myo5aQ99104 1853 aaKnown RBP20.79■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Samsn1P57725 372 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Drp2Q05AA6 957 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Gm11487Q5RIS0 354 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 LbpQ61805 481 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Ehd2Q8BH64 543 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Prr11Q8BHE0 368 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 VcpkmtQ8C436 228 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Olfr395Q8VGR3 312 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 MbipQ99LQ1 341 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Q9CYI0 393 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 PpihQ9D868 188 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Tmod3Q9JHJ0 352 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Baz2bA2AUY4 2123 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Slc6a16A0A1L1SR47 742 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Cspp1B2RX88 1205 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Mctp1E9PV86 951 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 GclmO09172 274 aaKnown RBP20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Epb41l4aP52963 686 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Pcmtd1P59913 357 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Mief2Q5NCS9 454 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Asic1Q6NXK8 526 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Tcaf3Q6QR59 914 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 PodnQ7TQ62 611 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Defb19Q8K3I8 83 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Cacnb1Q8R3Z5 597 aa20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Kri1Q8VDQ9 704 aaKnown RBP20.78■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Clec11aO88200 328 aa20.77■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Cyp11b2P15539 500 aa20.77■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Tap2P36371 702 aa20.77■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Clcn3P51791 818 aa20.77■□□□□ 0.92
Scn1b-203ENSMUST00000211945 Snx27Q3UHD6 539 aa20.77■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms