RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Ttll10A4Q9F3 704 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gm1993A6X8I0 212 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 SlxD3Z347 212 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Prl2c3P04768 224 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Lta4hP24527 611 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Nucb2P81117 420 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gucy2cQ3UWA6 1072 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Kiaa1211Q5PR69 1207 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 AlcamQ61490 583 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ddr2Q62371 854 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gja3Q64448 417 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Fam214aQ69ZK7 1075 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Cep95Q8BVV7 827 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tnpo2Q99LG2 887 aaKnown RBP8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Kmt2eQ3UG20 1868 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Adgra2Q91ZV8 1336 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Lcmt1A0A0U1RNF2 332 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ttll6A4Q9E8 822 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Diaph1O08808 1255 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Cops5O35864 334 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Cd70O55237 195 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tnfaip8l3Q3TBL6 204 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Mindy4Q3UQI9 744 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Adamts18Q4VC17 1219 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Usp37Q8C0R0 979 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Q8C5C9 218 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Snx29Q9D3S3 818 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Nudt5Q9JKX6 218 aa8.24□□□□□ -1.09
Usp40-204ENSMUST00000187758 Trim5E9PV98 497 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Per1O35973 1291 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Abcd1P48410 736 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 CtcfQ61164 736 aaKnown RBP8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tcf12Q61286 706 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ubap2lQ80X50 1107 aaKnown RBP8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Necab1Q8BG18 352 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Dpp9Q8BVG4 862 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 GanQ8CA72 597 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 PdgfcQ8CI19 345 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Bbs7Q8K2G4 715 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ccdc96Q9CR92 584 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ears2Q9CXJ1 523 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tbx20Q9ES03 445 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Myh11O08638 1972 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ugt1a8D3Z748 530 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ugt1a10E9PXN7 530 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Pgk2P09041 417 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Surf1P09925 306 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 MafbP54841 323 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 NfiaQ02780 532 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Rnf157Q3TEL6 685 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Cdc37Q61081 379 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 TbataQ7TSD4 393 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Polr3fQ921X6 316 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tas1r3Q925D8 858 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 NptxrQ99J85 493 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 CutaQ9CQ89 177 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gm7086A0A1W2P766 342 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Nfxl1E9Q8I7 918 aaKnown RBP8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Magea4F2Z493 315 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 MybP06876 636 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Zbtb5Q7TQG0 670 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Dusp4Q8BFV3 398 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Fbxo44Q8BK26 255 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Znf131Q8K3J5 619 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Acot11Q8VHQ9 594 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Hdhd5Q91WM2 419 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Emc2Q9CRD2 297 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ndst4Q9EQW8 872 aa8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Uso1Q9Z1Z0 959 aaKnown RBP8.23□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gm4985A2ALC6 410 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gm4841E9QAA8 417 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Apba3O88888 571 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Cln3Q61124 438 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tpd52Q62393 224 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Rcor2Q8C796 523 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 N4bp3Q8C7U1 537 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Trim32Q8CH72 655 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Dlk2Q8K1E3 382 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Brd3Q8K2F0 726 aaKnown RBP8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Med15Q924H2 789 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Grpel1Q99LP6 217 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Kdm8Q9CXT6 414 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Cfap53Q9D439 514 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gm5580A0A0N4SVP8 411 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Skor2A7M7C7 1008 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Etnk2A7MCT6 385 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gm4907B1AXB9 411 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Nfx1B1AY10 1114 aaKnown RBP8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Il2rbP16297 539 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Dcaf17Q3TUL7 519 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Znf280dQ68FE8 974 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tshz2Q68FE9 1030 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Atp6v0d2Q80SY3 350 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 D130040H23RikQ8BII3 405 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Fgd4Q91ZT5 766 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Eef1gQ9D8N0 437 aaKnown RBP8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Prl2c2P04095 224 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Tnni3P48787 211 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Adcy7P51829 1099 aa8.22□□□□□ -1.09
Usp40-204ENSMUST00000187758 Zc3h18Q0P678 948 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms