RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Ccdc87Q8CDL9 855 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Dusp19Q8K4T5 220 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Krt79Q8VED5 531 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Bzw1Q9CQC6 419 aaKnown RBP12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 PyglQ9ET01 850 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Nfs1Q9Z1J3 459 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Osbpl9A2A8Z1 736 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Stat3P42227 770 aaKnown RBP12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Znf667Q2TL60 609 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Trpc6Q61143 930 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Hif1aQ61221 836 aaKnown RBP12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Tpp2Q64514 1262 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Hdac10Q6P3E7 666 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 P3h4Q8K2B0 443 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Il17cQ8K4C5 194 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Lpin2Q99PI5 893 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Dnajc19Q9CQV7 116 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Fam187aQ9D3R5 417 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Sertad2Q9JJG5 309 aa12.44□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Rbm46P86049 533 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Agbl1Q09M05 972 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Trim80Q3V061 624 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Meis1Q60954 390 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Olfr832Q7TRG9 312 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Sec24bQ80ZX0 1251 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gpcpd1Q8C0L9 675 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Q9D5Q8 446 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Rabgef1Q9JM13 491 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Shank3Q4ACU6 1730 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Fbf1A2A870 1173 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Myo1eE9Q634 1107 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Lilrb3P97484 841 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 VrtnQ3SYK4 740 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gm5169Q5M8P2 212 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Jade3Q6IE82 823 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Mxd3Q80US8 206 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Fgd5Q80UZ0 1219 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Anapc5Q8BTZ4 740 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Slc51aQ8R000 340 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Haus2Q9CQS9 234 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 RnmtQ9D0L8 465 aaKnown RBP12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 PlekQ9JHK5 350 aaKnown RBP12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ddx25Q9QY15 484 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Znf394Q9Z1D9 521 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Apol8A2VDH7 339 aaKnown RBP12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Apba1B2RUJ5 842 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Casp8O89110 480 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Becn2P0DM65 447 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Rpusd2Q149F1 553 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Tatdn3Q3U1C6 294 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Fhdc1Q3ULZ2 1149 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gm5935Q497S0 212 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 PRAG1Q571I4 1179 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 SrlQ7TQ48 910 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Galnt17Q7TT15 598 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Lrrc14Q8VC16 493 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Slc5a4bQ91ZP4 660 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Snx24Q9CRB0 169 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Cep72Q9D3R3 646 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Tex21Q9R0U9 575 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Epb41l3Q9WV92 929 aa12.43□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 FscbA1EGX6 1074 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Atp2c2A7L9Z8 944 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Trappc11B2RXC1 1133 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Rsbn1lD3Z0K6 821 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Zscan18E9PUD6 809 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Sema4dO09126 861 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gna11P21278 359 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 GnaqP21279 359 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Nr2f2P43135 414 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Eya3P97480 510 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ag2Q3UPL5 249 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gm5592Q3V0A6 857 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 MaeaQ4VC33 396 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Krt12Q64291 487 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Rhbdf1Q6PIX5 856 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ddx19bQ8BZY3 494 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Fam228aQ8CDW1 299 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Luc7lQ9CYI4 371 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Cdc42ep4Q9JM96 349 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Abt1Q9QYL7 269 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 DexiQ9WUQ7 95 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 TyrobpO54885 114 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Atp6v0a2P15920 856 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Lmnb2P21619 596 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Serpinc1P32261 465 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ksr1Q61097 873 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ddx10Q80Y44 875 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Scyl2Q8CFE4 930 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 OtoaQ8K561 1137 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 McamQ8R2Y2 648 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Kctd10Q922M3 315 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 RtcbQ99LF4 505 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ccdc182Q9D9C6 152 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 MrgbpQ9DAT2 204 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Prpf4Q9DAW6 521 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Tjap1Q9DCD5 539 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Sh2b2Q9JID9 621 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gfpt2Q9Z2Z9 682 aa12.42□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gm4985A2ALC6 410 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms