RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Slc12a7Q9WVL3 1083 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Sucla2Q9Z2I9 463 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 PklrP53657 574 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Hps5P59438 1126 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Actr2P61161 394 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Frmd8Q3UFK8 466 aa28.27■■■□□ 2.12
Tpm1-216ENSMUST00000113707 Ap1b1O35643 943 aaKnown RBP28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Tp53P02340 387 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Ccnd3P30282 292 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Rufy4Q3TYX8 563 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Tcf12Q61286 706 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Lrrn2Q6PHP6 730 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 TbataQ7TSD4 393 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Adgra1Q8C4G9 578 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Creld2Q9CYA0 350 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Bcs1lQ9CZP5 418 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Rpap3Q9D706 660 aa28.26■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Ly9Q01965 654 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Tcerg1lQ3B807 590 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Trappc3lQ4KL14 181 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Shc3Q61120 474 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 RragaQ80X95 313 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 MtrrQ8C1A3 696 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Nrbp2Q91V36 499 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Ccdc43Q9CR29 222 aaKnown RBP28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 DohhA0A1Y7VJ29 135 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 1700018F24RikB2RW27 314 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Gcom1E9PZ54 550 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Nfxl1E9Q8I7 918 aaKnown RBP28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Men1O88559 611 aaKnown RBP28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 MyzapQ3UIJ9 466 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Kiaa1211Q5PR69 1207 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Pabpc4Q6PHQ9 660 aaKnown RBP28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Mrpl58Q8R035 206 aa28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 RnpepQ8VCT3 650 aaKnown RBP28.25■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Slc6a16A0A1L1SR47 742 aa28.24■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Ttll6A4Q9E8 822 aa28.24■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Timm44O35857 452 aa28.24■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Mmp15O54732 657 aa28.24■■■□□ 2.11
Tpm1-216ENSMUST00000113707 CbsQ91WT9 561 aa28.24■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Erp44Q9D1Q6 406 aa28.24■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Celf5D3Z4T1 395 aaKnown RBP28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Krt31Q61765 416 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Ctnna3Q65CL1 895 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Sass6Q80UK7 654 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Vps52Q8C754 723 aaKnown RBP28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Znf445Q8R2V3 986 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 A0A286YCQ6 122 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Bcat1P24288 386 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Psmb7P70195 277 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Dcaf17Q3TUL7 519 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Sh2d1b2Q45HK4 132 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Fndc3bQ6NWW9 1207 aaKnown RBP28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Frmd3Q8BHD4 595 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Eif3cQ8R1B4 911 aaKnown RBP28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Reep2Q8VCD6 254 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Traf7Q922B6 594 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Ppp1r3aQ99MR9 1089 aa28.23■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Zgrf1Q0VGT4 1863 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Thsd7bQ6P4U0 1607 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Otud7bB2RUR8 840 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Card6E9PWH2 1175 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 PurbO35295 324 aaKnown RBP28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 MafgO54790 162 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Pdlim7Q3TJD7 457 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 GartQ64737 1010 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Mettl25Q6NXH8 597 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Sgip1Q8VD37 806 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Olr1Q9EQ09 363 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Plod3Q9R0E1 741 aa28.22■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Gtf2bP62915 316 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Cyfip1Q7TMB8 1253 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Hook2Q7TMK6 716 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Lrrc24Q8BHA1 521 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Med15Q924H2 789 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Abcb11Q9QY30 1321 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Cd70O55237 195 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Stra6O70491 670 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 PrkceP16054 737 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Ifnar1P33896 590 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Atoh1P48985 351 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Tarbp2P97473 365 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Pou2f2Q00196 463 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Tmtc1Q3UV71 942 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Serpinb3dQ6UKZ0 387 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Azin2Q8BVM4 459 aa28.21■■■□□ 2.11
Tpm1-216ENSMUST00000113707 Arhgef10lA2AWP8 1280 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Axin2O88566 840 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Krt86P97861 486 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 IgflQ6B9Z0 140 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Iws1Q8C1D8 766 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Spon1Q8VCC9 807 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Tmem39aQ9CYC3 486 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Prl2b1Q9DAZ2 228 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Psma7Q9Z2U0 248 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Trpm7Q923J1 1863 aa28.2■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Heatr4E9Q357 955 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Gjd2O54851 321 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ces1eQ64176 562 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Hdac10Q6P3E7 666 aa28.19■■■□□ 2.1
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms