RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Dph6Q9CQ28 267 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 ArpinQ9D0A3 226 aa12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Sf3a3Q9D554 501 aaKnown RBP12.53□□□□□ -0.4
Vps54-202ENSMUST00000109578 Gm45261A0A1B0GSP6 197 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 GabreA2AMW3 916 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Flvcr1B2RXV4 560 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Wdr72D3YYM4 1114 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Acot6Q32Q92 419 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Kiaa0319Q5SZV5 1081 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Grik5Q61626 979 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Sin3bQ62141 1098 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 SpidrQ8BGX7 933 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Calhm4Q8CE93 315 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 3830403N18RikQ9D6C3 208 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 MefvQ9JJ26 767 aa12.52□□□□□ -0.4
Vps54-202ENSMUST00000109578 Osbpl9A2A8Z1 736 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Gm3095E9Q058 166 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Hspa9P38647 679 aaKnown RBP12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Traf5P70191 558 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Xxylt1Q3U4G3 392 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Tax1bp1Q3UKC1 814 aaKnown RBP12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Trim47Q8C0E3 641 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Depdc1aQ8CIG0 804 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Tbx22Q8K402 517 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Dcaf8Q8N7N5 591 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Bud13Q8R149 637 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Aipl1Q924K1 328 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Prkab1Q9R078 270 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ttc13A0A1L1SSC7 844 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Zc3h7bF8VPP8 982 aaKnown RBP12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Gsg1l2M0QWL6 290 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 FdxrQ61578 494 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 CrkQ64010 304 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Mcf2lQ64096 1149 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Dr1Q91WV0 176 aa12.52□□□□□ -0.41
Vps54-202ENSMUST00000109578 Gm38392E9Q2A2 434 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Siah1bQ06985 282 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Scarf1Q5ND28 820 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 PdxkQ8K183 312 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 4930523C07RikE9Q2T4 99 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Esr2O08537 530 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Nlrp4cQ3TKR3 982 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ice2Q3UZ18 988 aaKnown RBP12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 MaeaQ4VC33 396 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Lilrb4Q64281 335 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Atp2b4Q6Q477 1205 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Fbxo11Q7TPD1 930 aaKnown RBP12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Tmc4Q7TQ65 694 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 4930550L24RikQ99PA7 320 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Tlr2Q9QUN7 784 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Flt1P35969 1333 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Xrcc6P23475 608 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Gja5Q01231 358 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Nell2Q61220 819 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Srrm3Q80WV7 648 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ttc16Q8C1F5 767 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Klc4Q9DBS5 619 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Mmp15O54732 657 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ncf2O70145 525 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Mybl2P48972 704 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Krt15Q61414 452 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Erlin2Q8BFZ9 340 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Calml4Q91WQ9 153 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Snx10Q9CWT3 201 aa12.51□□□□□ -0.41
Vps54-202ENSMUST00000109578 Scgb2b7D3YYY1 112 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Klra5Q60652 266 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Wdr44Q6NVE8 915 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 IarsQ8BU30 1262 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 SucoQ8C341 1250 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 P3h4Q8K2B0 443 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Bzw2Q91VK1 419 aaKnown RBP12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ebag9Q9D0V7 213 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Drap1Q9D6N5 205 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Gkap1Q9JMB0 366 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Col5a2Q3U962 1497 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Nova2D3YVV7 556 aaKnown RBP12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Rgl1Q60695 768 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Fam228aQ8CDW1 299 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Mboat7Q8CHK3 473 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 MypopQ8R4U1 393 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Dnajc28Q8VCE1 385 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Stk4Q9JI11 487 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Actn2Q9JI91 894 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ltbp1Q8CG19 1712 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 DohhA0A1Y7VJ29 135 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 R3hdm1E9Q9Q2 1135 aaKnown RBP12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Dph1Q5NCQ5 438 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Zdhhc24Q6IR37 284 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Nap1l4Q78ZA7 375 aaKnown RBP12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Rps6ka6Q7TPS0 764 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 AdalQ80SY6 360 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 P2ry10Q8BFU7 328 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 HhatQ8BMT9 499 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Riox2Q8CD15 465 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ago4Q8CJF8 861 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 BlmhQ8R016 455 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Nup58Q8R332 587 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Cbwd1Q8VEH6 393 aa12.5□□□□□ -0.41
Vps54-202ENSMUST00000109578 Trappc11B2RXC1 1133 aa12.49□□□□□ -0.41
Vps54-202ENSMUST00000109578 InhbeO08717 350 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms