RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Dpp9Q8BVG4 862 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cep95Q8BVV7 827 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Q8C5C9 218 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 GanQ8CA72 597 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Lrrc56Q8K375 552 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Spint1Q9R097 507 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Hebp1Q9R257 190 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 DexiQ9WUQ7 95 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Olfr67F8VPJ8 320 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Serpinb8O08800 374 aaKnown RBP23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 GmnnO88513 206 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 PrkczQ02956 592 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Lrrc14bQ3UJB3 510 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Gucy2cQ3UWA6 1072 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ddr2Q62371 854 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Znf280dQ68FE8 974 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Tbc1d31Q6NXY1 996 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Pls3Q99K51 630 aa23.31■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Slc6a16A0A1L1SR47 742 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ugt1a8D3Z748 530 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ugt1a10E9PXN7 530 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Gm10378F6XQQ1 160 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Tarbp2P97473 365 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Fscn2Q32M02 492 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Tcf12Q61286 706 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Pank4Q80YV4 820 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Znf784Q8BI69 297 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Pym1Q8CHP5 203 aaKnown RBP23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Bbs7Q8K2G4 715 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Rpn1Q91YQ5 608 aaKnown RBP23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Trip11E9Q512 1976 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ttc38A3KMP2 465 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 1700018F24RikB2RW27 314 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Nkx1-1G3UXB3 402 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cetn3O35648 167 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Nr2f2P43135 414 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Srrm1Q52KI8 946 aaKnown RBP23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Fam183bQ5NC57 135 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Tpm4Q6IRU2 248 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Sestd1Q80UK0 696 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Slc14a1Q8VHL0 384 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cd2bp2Q9CWK3 342 aaKnown RBP23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Klhl10Q9D5V2 608 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Znf704Q9ERQ3 566 aa23.3■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Astn1Q61137 1302 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Etnk2A7MCT6 385 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Pdzrn4E9PUZ9 1014 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Prl2c2P04095 224 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Lta4hP24527 611 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 EdnrbP48302 442 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Znf354cQ571J5 560 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 AlcamQ61490 583 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Sycp1Q62209 993 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Fam214aQ69ZK7 1075 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Osbpl2Q8BX94 484 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Traf3ip3Q8C0G2 513 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Mtmr6Q8VE11 617 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Tc2nQ91XT6 489 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Smtnl1Q99LM3 459 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cmtr1Q9DBC3 837 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 RptorQ8K4Q0 1335 aa23.29■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 DohhA0A1Y7VJ29 135 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Zfp781Q0P5U5 243 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Dhx37Q6NZL1 1150 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Prpf40bQ80W14 870 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ddrgk1Q80WW9 315 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cracr2bQ80ZJ8 394 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Bclaf1Q8K019 919 aaKnown RBP23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Gnl2Q99LH1 728 aaKnown RBP23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Snx29Q9D3S3 818 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Olr1Q9EQ09 363 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ush1cQ9ES64 910 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Limd1Q9QXD8 668 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Becn1O88597 448 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Pgk2P09041 417 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cdk4P30285 303 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Kcnma1Q08460 1209 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Pdcl2Q78Y63 240 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cdkn2aipQ8BI72 563 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Stoml1Q8CI66 399 aa23.28■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Chrna9G3X8Z7 479 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 NfkbieO54910 364 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 AgtP11859 477 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Hoxd10P28359 340 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Rpl13P47963 211 aaKnown RBP23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Anks1aP59672 1150 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Muc1Q02496 630 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Kmt5aQ2YDW7 349 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Cln3Q61124 438 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 IgflQ6B9Z0 140 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ddx10Q80Y44 875 aaKnown RBP23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ece2Q80Z60 881 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 C1qtnf12Q8R2Z0 308 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Hdhd5Q91WM2 419 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 CutaQ9CQ89 177 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ccdc89Q9DA73 370 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Hic1Q9R1Y5 733 aa23.27■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Lcmt1A0A0U1RNF2 332 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Fam129cD3YZB0 591 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Cops5O35864 334 aa23.26■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms