RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Prr5lA2AVJ5 370 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Abcb5B5X0E4 1255 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Chp1P61022 195 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ttf2Q5NC05 1138 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Afg3l1Q920A7 789 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 MypnQ5DTJ9 1315 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Apba1B2RUJ5 842 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Arhgap6O54834 987 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Suds3Q8BR65 328 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Iqcf1Q9D9K8 182 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Hyou1Q9JKR6 999 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Itgb1bp2Q9R000 350 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Zranb2Q9R020 330 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Arhgap23Q69ZH9 1483 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Akap5D3YVF0 745 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm5926E9PWJ8 236 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Usp50Q6P8X6 390 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 PigoQ9JJI6 1093 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Alox15P39654 663 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Hspa8P63017 646 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ccna1Q61456 421 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 NemfQ8CCP0 1064 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Alpk1Q9CXB8 1231 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Mis18aQ9CZJ6 204 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Yeats2Q3TUF7 1407 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gm8994E9PV04 411 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 RaraP11416 462 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Arl4cP61208 192 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Rasgrf2P70392 1189 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Q3KNL4 93 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Churc1Q6DG52 112 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 MtbpQ8BJS8 894 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Phactr3Q8BYK5 558 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Ppp1r16bQ8VHQ3 568 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Q91WD4 421 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Fgd4Q91ZT5 766 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Zmynd10Q99ML0 440 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Polr3cQ9D483 533 aa10.03□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Kansl3A2RSY1 903 aaKnown RBP10.02□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Sin3bQ62141 1098 aa10.02□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Krt40Q6IFX3 439 aa10.02□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Nme8Q715T0 586 aa10.02□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Mphosph6Q9D1Q1 161 aa10.02□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Gstt4Q9D4P7 240 aa10.02□□□□□ -0.8
Prpf40a-201ENSMUST00000076313 Pja1O55176 578 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ifnl2Q4VK74 193 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Zrsr1Q64707 428 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Depdc5P61460 1591 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm45261A0A1B0GSP6 197 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cdc27A2A6Q5 825 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Vti1aO89116 217 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Wdr91Q7TMQ7 748 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Defb15Q8R2I5 79 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ttc4Q8R3H9 386 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cdk5rap3Q99LM2 503 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gadd45gQ9Z111 159 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ptk2P34152 1090 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Parp3Q3ULW8 533 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tasp1Q8R1G1 420 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rpa3Q9CQ71 121 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 PycardQ9EPB4 193 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Dpp7Q9ET22 506 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Atp7bQ64446 1462 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Kif23E9Q5G3 953 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Slc12a1P55014 1095 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Kiaa1841Q68FF0 718 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Susd4Q8BH32 490 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Trpd52l3Q9CQ14 231 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rnf6Q9DBU5 667 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rgs3Q9DC04 966 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Arhgef7Q9ES28 862 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Sik3Q6P4S6 1311 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Itpripl1A2ASA8 547 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 InhbeO08717 350 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Setd4P58467 439 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Krt80Q0VBK2 452 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Klhl11Q8CE33 709 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cd248Q91V98 765 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Hdac11Q91WA3 347 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Setd6Q9CWY3 473 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Vps33aQ9D2N9 598 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Fbxo3Q9DC63 480 aa10.02□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Itsn2Q9Z0R6 1659 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm15262A0A140LIQ5 728 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccdc194A0A140LIT1 234 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Mcl1P97287 331 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Mphosph8Q3TYA6 858 aaKnown RBP10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pim2Q62070 370 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 ThrspQ62264 150 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Med15Q924H2 789 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Drap1Q9D6N5 205 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Slc40a1Q9JHI9 570 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Setd1bQ8CFT2 1985 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Clrn2B2RVW2 232 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm3402K7N5P2 326 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ap5z1Q3U829 807 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rasa3Q60790 834 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Fndc3aQ8BX90 1198 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pgm1Q9D0F9 562 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Klhl41A2AUC9 606 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms