RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Krt31Q61765 416 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ahcyl1Q80SW1 530 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Vstm4T1NXB5 319 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Rps6P62754 249 aaKnown RBP11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Tnfaip2Q61333 691 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ccdc90bQ8C3X2 256 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Atg14Q8CDJ3 492 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 FlcnQ8QZS3 579 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Dctn2Q99KJ8 402 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Snf8Q9CZ28 258 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pus3Q9JI38 481 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 PtprcP06800 1291 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Tmc5Q32NZ6 967 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Zc3h15Q3TIV5 426 aaKnown RBP11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Xlr3aQ60595 226 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ino80dQ66JY2 873 aaKnown RBP11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Fbxo38Q8BMI0 1194 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Tgif2lx2Q8K5B9 231 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 A530032D15RikE9Q422 215 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 KitP05532 979 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Atp5dQ9D3D9 168 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ttc33Q9D6K7 262 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ice1E9Q286 2241 aaKnown RBP11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Slc9a5B2RXE2 898 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Exoc7O35250 697 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pcgf5Q3UK78 256 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Hdgfl2Q3UMU9 669 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Hspa13Q8BM72 471 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Nccrp1G3X9C2 266 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Msh2P43247 935 aaKnown RBP11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pdcd2P46718 343 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Wfs1P56695 890 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Nme8Q715T0 586 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ppp4r4Q8C0Y0 875 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ipo11Q8K2V6 975 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gtf2ird1Q9JI57 1104 aaKnown RBP11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Dctpp1Q9QY93 170 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Apobec2Q9WV35 224 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Lrrc9Q8CDN9 1456 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Apol6B7ZC55 329 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pgrmc1O55022 195 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Garnl3Q3V0G7 1038 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Nr1h4Q60641 488 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Coq8aQ60936 645 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Krt32Q62168 407 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Khdc3Q9CWU5 440 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Bcl10Q9Z0H7 233 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Tcof1O08784 1320 aaKnown RBP11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sox6P40645 827 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Aggf1Q7TN31 711 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Arhgap25Q8BYW1 648 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Bbs2Q9CWF6 721 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cyp26a1O55127 497 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Tnni3P48787 211 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cav1P49817 178 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Galnt17Q7TT15 598 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ctdspl2Q8BG15 465 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Trim66Q924W6 1242 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Nsmce3Q9CPR8 279 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Kcna2P63141 499 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ccdc127Q3TC33 260 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Usp28Q5I043 1051 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Lrrc8eQ66JT1 795 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ushbp1Q8R370 680 aa11.05□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Klhl34A2AI76 644 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Surf1P09925 306 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ttf2Q5NC05 1138 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Slc27a1Q60714 646 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ipo5Q8BKC5 1097 aaKnown RBP11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Znf451Q8C0P7 1056 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Hps3Q91VB4 1002 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Abcf2Q99LE6 628 aaKnown RBP11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm21083A0A0G2JFD5 256 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Fam47eD3YWC7 402 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Speer4cG3UXD1 256 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sval3Q76I99 144 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Rsbn1Q80T69 795 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Slc17a8Q8BFU8 601 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Dnajc9Q91WN1 259 aaKnown RBP11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Nxf1Q99JX7 618 aaKnown RBP11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ska2Q9CR46 120 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Rbm31yQ9D3U4 565 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gins2Q9D600 185 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Llcfc1Q9D9P8 108 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Krt17Q9QWL7 433 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pja1O55176 578 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 PcQ05920 1178 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sarm1Q6PDS3 724 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Best2Q8BGM5 508 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Anks1bQ8BIZ1 1259 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ssfa2Q922B9 1252 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cdk13Q69ZA1 1511 aaKnown RBP11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Rexo5D3YW29 759 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Hps1O08983 704 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Il7P10168 154 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cdh15P33146 784 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Yy1Q00899 414 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Ube2oQ6ZPJ3 1288 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Impg2Q80XH2 1243 aa11.04□□□□□ -0.64
Col6a3-201ENSMUST00000056925 AacsQ9D2R0 672 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms