RNA–Protein interactions for RNA: ENSMUST00000056907.6

Smcr8-201, Transcript of Guanine nucleotide exchange protein SMCR8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smcr8, Length 7,391 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8-201ENSMUST00000056907 Usp28Q5I043 1051 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Mxd3Q80US8 206 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Pdzph1Q8BGR1 1238 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Pdia6Q922R8 440 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Zcchc17Q9ESX4 241 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Add2Q9QYB8 725 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Gm5689F6Y2A6 97 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Kdelc2G5E897 503 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Cdo1P60334 200 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ttf2Q5NC05 1138 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Rnf168Q80XJ2 565 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Dnm3Q8BZ98 863 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ror2Q9Z138 944 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Zc3h7bF8VPP8 982 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Vmn2r78K7N6U5 853 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Nr1h4Q60641 488 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Klhl11Q8CE33 709 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Lsm14bQ8CGC4 385 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Slc26a6Q8CIW6 758 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ccdc65Q8VHI7 493 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Rrp15Q9CYX7 281 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Chordc1Q9D1P4 331 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Fads3Q9JJE7 449 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Abt1Q9QYL7 269 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 GabrdP22933 449 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Celf1P28659 486 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 HdxQ14B70 692 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 LrmpQ60664 539 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Slc44a1Q6X893 653 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Supt20hQ7TT00 530 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Appl1Q8K3H0 707 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Acat1Q8QZT1 424 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 SmtnQ921U8 923 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Grk2Q99MK8 689 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 1700013H16RikQ9DAC5 291 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Gm43738A0A0G2JEA5 862 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 MtrA6H5Y3 1253 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ass1P16460 412 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 HpdP49429 393 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 RenbpP82343 430 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ppp1r7Q3UM45 361 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ncoa4Q5U4H9 625 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Znf148Q61624 794 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Wdr91Q7TMQ7 748 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ppp1r37Q8BKR5 712 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 MrrfQ9D6S7 262 aaKnown RBP10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ercc4Q9QZD4 917 aa10.04□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Brpf3B2KF05 1204 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Vwa3bJ9JI28 736 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Sptlc1O35704 473 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Gfpt1P47856 697 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Dpcr1Q3TNW5 500 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Znf827Q505G8 1078 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Trim17Q7TPM3 477 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ppm1kQ8BXN7 372 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Strip1Q8C079 837 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Rcor2Q8C796 523 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Kbtbd13Q8C828 458 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Nek9Q8K1R7 984 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 TbcbQ9D1E6 244 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Mrps9Q9D7N3 390 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 HnrnpcQ9Z204 313 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Adgrl3Q80TS3 1537 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 FscbA1EGX6 1074 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Lrrc63A6H694 637 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Zfp788E9Q980 884 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Cyp11b1Q3TG86 501 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ankrd34bQ3UUF8 508 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Lrfn2Q80TG9 788 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Arhgap15Q811M1 481 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ccdc87Q8CDL9 855 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 CenpsQ9D084 142 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Vmn2r121A2BE32 847 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Casp8O89110 480 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Rbp3P49194 1234 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Patl1Q3TC46 770 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Nfe2l2Q60795 597 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Pcdhb14Q6PB90 796 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Enox1Q8BHR2 643 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Scfd1Q8BRF7 639 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Cog3Q8CI04 820 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Mlc1Q8VHK5 382 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ccdc77Q9CZH8 489 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 ChmQ9QXG2 665 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ddx25Q9QY15 484 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Arhgef12Q8R4H2 1543 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 L1camP11627 1260 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Nedd4P46935 887 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Lig3P97386 1015 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Kcns3Q8BQZ8 491 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Stx19Q8R1Q0 292 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Cnpy3Q9DAU1 276 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Plxnc1Q9QZC2 1574 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 March10E9PX79 788 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Casp14O89094 257 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 OsbpQ3B7Z2 805 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Smyd5Q3TYX3 416 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Rbm20Q3UQS8 1199 aaKnown RBP10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 Ccdc40Q8BI79 1192 aa10.03□□□□□ -0.8
Smcr8-201ENSMUST00000056907 LzicQ8K3C3 190 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms