RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Usp20Q8C6M1 916 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Kiaa0391Q8JZY4 584 aaKnown RBP9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ppp1r16bQ8VHQ3 568 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ribc1Q9D0B8 379 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Abhd2Q9QXM0 425 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Dhtkd1A2ATU0 921 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Nfx1B1AY10 1114 aaKnown RBP9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Timm44O35857 452 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Mt-CybP00158 381 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Lta4hP24527 611 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Abcd1P48410 736 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Adcy7P51829 1099 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Irf5P56477 497 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Nploc4P60670 608 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Foxn1Q61575 648 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ddr2Q62371 854 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Dhx32Q8BZS9 744 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Spice1Q8C804 860 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ccdc14Q8K2J4 934 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Matr3Q8K310 846 aaKnown RBP9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Wrap53Q8VC51 532 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Mtmr1Q9Z2C4 669 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Etnk2A7MCT6 385 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm10378F6XQQ1 160 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 GmnnO88513 206 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Becn1O88597 448 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tpm1P58771 284 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm3414Q3TNU4 584 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Abcf1Q6P542 837 aaKnown RBP9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Q8C5C9 218 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Mtmr6Q8VE11 617 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cd2bp2Q9CWK3 342 aaKnown RBP9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tbx20Q9ES03 445 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Sh2b2Q9JID9 621 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Prpmp5E9PXN1 296 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Znf568E9PYI1 671 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Mtco1P00397 514 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Morf4l1P60762 362 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Rnf157Q3TEL6 685 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Nlrp4cQ3TKR3 982 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Xpnpep1Q6P1B1 623 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Prpf40bQ80W14 870 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Znf784Q8BI69 297 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Slc45a1Q8BIV7 751 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Chtf18Q8BIW9 969 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Mei4Q8BRM6 389 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Polr3fQ921X6 316 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Hs6st3Q9QYK4 470 aa9.57□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm1993A6X8I0 212 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Skint7A7XV04 395 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 SlxD3Z347 212 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Spdye4aQ5IBH6 268 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Atp13a4Q5XF90 1193 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Lamb3Q61087 1168 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Serpinb3dQ6UKZ0 387 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Spata32Q8C5V0 334 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pls3Q99K51 630 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ndst4Q9EQW8 872 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Znhit2Q9QY66 399 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Myh11O08638 1972 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Zgrf1Q0VGT4 1863 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Kmt2eQ3UG20 1868 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Zfand4D3Z3C6 739 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm4841E9QAA8 417 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pip4k2aO70172 405 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 P01734 135 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 RdxP26043 583 aaKnown RBP9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tnni3P48787 211 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 LxnP70202 222 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Zc3h18Q0P678 948 aaKnown RBP9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Znf354cQ571J5 560 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Etaa1Q5SVT3 877 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cdc37Q61081 379 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Zfp90Q61967 636 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ankrd24Q80VM7 985 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ddrgk1Q80WW9 315 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Dnm3Q8BZ98 863 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ccz1Q8C1Y8 480 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Atp1a1Q8VDN2 1023 aaKnown RBP9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tc2nQ91XT6 489 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tnpo2Q99LG2 887 aaKnown RBP9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pkp2Q9CQ73 795 aaKnown RBP9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Emc2Q9CRD2 297 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 IydQ9DCX8 285 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Olr1Q9EQ09 363 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Col24a1Q30D77 1733 aa9.56□□□□□ -0.88
Trim39-201ENSMUST00000042717 Fndc3c1Q6DFV6 1356 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm4907B1AXB9 411 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 OgdhlE9Q7L0 1029 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tnfrsf11aO35305 625 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ap1b1O35643 943 aaKnown RBP9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tarbp2P97473 365 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Drp2Q05AA6 957 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Carmil2Q3V3V9 1296 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Msantd2Q6NZR2 559 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Sh3d21Q7TSG5 549 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Q8BGN9 141 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tmem87aQ8BXN9 555 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Slc9b1Q8C0X2 565 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Iws1Q8C1D8 766 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms