RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Serpina1bP22599 413 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Epas1P97481 874 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Oxsr1Q6P9R2 527 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gramd1bQ80TI0 738 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ces1fQ91WU0 561 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Vstm4T1NXB5 319 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Eno3P21550 434 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Sult1d1Q3UZZ6 295 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm3402K7N5P2 326 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Alpk1Q9CXB8 1231 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Add3Q9QYB5 706 aaKnown RBP17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tcp11x2A2AEI7 503 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pcgf5Q3UK78 256 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Asic4Q7TNS7 539 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Vmn1r199Q8R280 367 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm20721E9Q2U8 318 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Soat2O88908 525 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Abcb1bP06795 1276 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 PtprcP06800 1291 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Rfx6Q8C7R7 927 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Synj2Q9D2G5 1434 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Zfp212G3X8R7 492 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gimap4Q99JY3 219 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pold3Q9EQ28 462 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm32742A0A1B0GT42 1604 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Lamc2Q61092 1191 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Fam160b1Q8CDM8 764 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cdc42bpgQ80UW5 1551 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm8897L7N294 181 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cyp11b1Q3TG86 501 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Fsd1lQ8BYN5 507 aa17.69■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Zfp626A0A0U1RQ84 676 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Rfx8D3YU81 596 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ndufa13Q9ERS2 144 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Anxa1P10107 346 aaKnown RBP17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pkp1P97350 728 aaKnown RBP17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Bud13Q8R149 637 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cdca7lQ922M5 438 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Slc7a1Q09143 622 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 KynuQ9CXF0 464 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tjap1Q9DCD5 539 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ddx25Q9QY15 484 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tex21Q9R0U9 575 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pcdhb9E9Q5G2 828 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Lipo1J3QME6 396 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Dynlt1P51807 113 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Rpf1Q7TND5 349 aaKnown RBP17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ctdspl2Q8BG15 465 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nrbp1Q99J45 535 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Fam84aQ9D650 292 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cdc42bpbQ7TT50 1713 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Clcn6O35454 870 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nab2Q61127 525 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ttll4Q80UG8 1193 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Snx30Q8CE50 437 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ncoa5Q91W39 579 aaKnown RBP17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Vps33aQ9D2N9 598 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Rusc2Q80U22 1514 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm28042B7ZCM9 1014 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 1700013D24RikQ0P521 120 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nr1i3O35627 358 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Krt35Q497I4 455 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Vipas39Q8BGQ1 491 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nlgn1Q99K10 843 aa17.68■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pabpc1lA2A5N3 607 aaKnown RBP17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ankrd13cQ3UX43 541 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pard3bQ9CSB4 1203 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pde4aO89084 844 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Kbtbd3Q8BHI4 607 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Miga2Q8BK03 593 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tekt1Q9DAJ2 418 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Apba1B2RUJ5 842 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Axdnd1Q3UZ57 424 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Hpcal4Q8BGZ1 191 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Kirrel3Q8BR86 778 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ccdc151Q8BSN3 593 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Osbpl6Q8BXR9 959 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Dclre1bQ8C7W7 541 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Dis3l2Q8CI75 870 aaKnown RBP17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gga1Q8R0H9 635 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Dthd1E9PZX1 795 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 E330034G19RikQ3UWX6 351 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 AarsQ8BGQ7 968 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tbc1d23Q8K0F1 684 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Bbs7Q8K2G4 715 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Disp1Q3TDN0 1521 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Hif1aQ61221 836 aaKnown RBP17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Fam161bQ8CB59 589 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm11549A0A286YD83 63 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Slc4a1P04919 929 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Zranb2Q9R020 330 aaKnown RBP17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 AlkP97793 1621 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Acad12D3Z7X0 555 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cyth2P63034 400 aaKnown RBP17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Mcl1P97287 331 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 CntrobQ8CB62 887 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 1700016D06RikQ9DAA5 166 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 EcsitQ9QZH6 435 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cacna1dQ99246 2179 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Myh9Q8VDD5 1960 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms