RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rsph3bQ9DA80 389 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cmtr1Q9DBC3 837 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 CsadQ9DBE0 493 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Klra10Q9R1G6 266 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Zc3h7bF8VPP8 982 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 YwhagP61982 247 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Myo1gQ5SUA5 1024 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Lrrn2Q6PHP6 730 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Znf12Q7TSI0 686 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Actr5Q80US4 605 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Klhl38Q8BSF5 581 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 HlfQ8BW74 295 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ppm1kQ8BXN7 372 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Them5Q9CQJ0 248 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tktl2Q9D4D4 627 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Usp31E9Q6Y8 1344 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Nup62clA2AG10 272 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Rpusd2Q149F1 553 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cnga4Q3UW12 575 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Znf827Q505G8 1078 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 NfrkbQ6PIJ4 1296 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pja2Q80U04 707 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ap3m2Q8R2R9 418 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 GrapQ9CX99 217 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cnot8Q9D8X5 292 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Peg12Q9WVA7 283 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Mroh7A2AVR2 1279 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 GssP51855 474 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Foxp2P58463 714 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 BcrQ6PAJ1 1270 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Rpf1Q7TND5 349 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Lsm14bQ8CGC4 385 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gipc1Q9Z0G0 333 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pramel3A2AHA7 463 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm7903A2AWL1 463 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 AV320801A2AWL3 467 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm15023L7MUB4 467 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Man1a2P39098 641 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Sesn2P58043 480 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Arl1P61211 181 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 SnrpfP62307 86 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Lrch2Q3UMG5 773 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Fam81aQ3UXZ6 364 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Spdye4aQ5IBH6 268 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Fam196bQ6GQV1 535 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Hdac10Q6P3E7 666 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pnma3Q8JZW8 466 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ttc1Q91Z38 292 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Foxp3Q99JB6 429 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pla2g12bQ99P27 195 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pik3c2bE9QAN8 1632 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Olfr552E9Q545 317 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Nedd4P46935 887 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Kcnma1Q08460 1209 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Lmntd2Q0VET5 664 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tmc4Q7TQ65 694 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ireb2Q811J3 963 aaKnown RBP11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pdzph1Q8BGR1 1238 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Scrn1Q9CZC8 414 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stx12Q9ER00 274 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Rps6ka2Q9WUT3 733 aa11.07□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ccdc175E9PVB3 822 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ptk2P34152 1090 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stat3P42227 770 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Vars2Q3U2A8 1060 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stxbp5Q8K400 1152 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Riok3Q9DBU3 519 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 AatfQ9JKX4 526 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tob2Q9JM55 345 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Akt3Q9WUA6 479 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm3127E9Q9P5 263 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm3453K7N724 263 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gjb4Q02738 266 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Acot6Q32Q92 419 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Usp49Q6P9L4 685 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 SucoQ8C341 1250 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Alg3Q8K2A8 438 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Dhx58Q99J87 678 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Psma8Q9CWH6 250 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Spc24Q9D083 201 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tube1Q9D6T1 475 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stk32bQ9JJX8 414 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 EcsitQ9QZH6 435 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stat2Q9WVL2 923 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Twf2Q9Z0P5 349 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gimd1E9PW74 217 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Orc4O88708 433 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Slc3a2P10852 526 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Trmt10cQ3UFY8 414 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ccdc51Q3URS9 406 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stk38lQ7TSE6 464 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ppp4r1Q8K2V1 951 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Add1Q9QYC0 735 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Eif3dO70194 548 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Aco1P28271 889 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Sycp3P70281 254 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Sec23aQ01405 765 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tmem35bQ3U0Y2 150 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Kctd16Q5DTY9 427 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Smarca1Q6PGB8 1046 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms