RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Lyve1Q8BHC0 318 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 AbraQ8BUZ1 375 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fam84aQ9D650 292 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Trmt112Q9DCG9 125 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Itsn2Q9Z0R6 1659 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gngt2Q61017 69 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Kif11Q6P9P6 1052 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fip1l1Q9D824 581 aaKnown RBP10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ing2Q9ESK4 281 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Cops2P61202 443 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 HltfQ6PCN7 1003 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ppp2r5aQ6PD03 486 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rusc2Q80U22 1514 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Kansl3A2RSY1 903 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rexo5D3YW29 759 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Dpf2Q61103 391 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Nlrp14Q6B966 993 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Alx1Q8C8B0 326 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ppp4r1Q8K2V1 951 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Nxf1Q99JX7 618 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Taf7lQ9D3R9 471 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 LrmdaQ9D9B4 229 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pms2P54279 859 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Il1rapl1P59823 695 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Sema3eP70275 775 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Crybg3Q80W49 1005 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Anapc5Q8BTZ4 740 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ddx47Q9CWX9 455 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Batf3Q9D275 118 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 IydQ9DCX8 285 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gtf2ird1Q9JI57 1104 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Hic1Q9R1Y5 733 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 LdhbP16125 334 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Thumpd3P97770 505 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Trim72Q1XH17 477 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gga2Q6P5E6 603 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Papd7Q6PB75 542 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Zfyve19Q9DAZ9 389 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Serpina1eQ00898 413 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 WhrnQ80VW5 918 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Chn2Q80XD1 332 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Bzw1Q9CQC6 419 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 NkapQ9D0F4 415 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm3127E9Q9P5 263 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm3453K7N724 263 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 HelbQ6NVF4 1074 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rfx6Q8C7R7 927 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ccdc28bQ8CEG5 200 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 NptxrQ99J85 493 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Hyou1Q9JKR6 999 aaKnown RBP10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Apobec2Q9WV35 224 aa10.85□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm45194A0A140LJG2 572 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Stox1B2RQL2 990 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Lilrb4Q64281 335 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 PlvapQ91VC4 438 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Anxa9Q9JHQ0 345 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Plod1Q9R0E2 728 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Atp2c2A7L9Z8 944 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Upf3bQ3ULL6 472 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mcf2lQ64096 1149 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tmem132dQ76HP3 1097 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Emilin1Q99K41 1017 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Med7Q9CZB6 233 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tnfrsf10bQ9QZM4 381 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fam81bA0A140LI28 432 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Map7d3A2AEY4 876 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Lrriq4A6H6A4 596 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Krt80Q0VBK2 452 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Arhgap44Q5SSM3 814 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 GnptabQ69ZN6 1235 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Prdm4Q80V63 803 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Alkbh8Q80Y20 664 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Zfp418Q8BFS8 652 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Lrrc14Q8VC16 493 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm5926E9PWJ8 236 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Exoc4O35382 975 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Top3aO70157 1003 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rasgrp4Q8BTM9 673 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Cnot8Q9D8X5 292 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rabgap1lA6H6A9 815 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tmem232Q5K6N0 675 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Satb1Q60611 764 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Usp27Q8CEG8 438 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Polr3cQ9D483 533 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Sept1P42209 366 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pbxip1Q3TVI8 727 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Letm2Q7TNU7 480 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Chmp2bQ8BJF9 213 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Usp38Q8BW70 1042 aa10.84□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Hspa1lP16627 641 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ptk2P34152 1090 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mybl1P51960 751 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mif4gdQ3UBZ5 222 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Garnl3Q3V0G7 1038 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Hif1aQ61221 836 aaKnown RBP10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Acap3Q6NXL5 833 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Igf2bp3Q9CPN8 579 aaKnown RBP10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ppp1r2Q9DCL8 206 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Klra17Q9JMA4 273 aa10.83□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Serpina16D3Z660 418 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms