RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Exoc3Q6KAR6 755 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Naa35Q6PHQ8 725 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 MslnlQ8C160 685 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Defb15Q8R2I5 79 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Bst2Q8R2Q8 172 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Dqx1Q924H9 718 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Bcs1lQ9CZP5 418 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 PpihQ9D868 188 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Sertad2Q9JJG5 309 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 CenphQ9QYM8 241 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Celf2Q9Z0H4 508 aaKnown RBP12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Eif2ak1Q9Z2R9 619 aa12.4□□□□□ -0.42
Ddx56-201ENSMUST00000004507 Krt36B1AQ75 473 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Nfxl1E9Q8I7 918 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Snap25P60879 206 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Dpcr1Q3TNW5 500 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Xxylt1Q3U4G3 392 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Lrig2Q52KR2 1054 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Igf2bp2Q5SF07 592 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Q6PD19 689 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Igsf3Q6ZQA6 1194 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Tmc3Q7TQ69 1130 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Pank4Q80YV4 820 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Trim6Q8BGE7 488 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 F13a1Q8BH61 732 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Chtf18Q8BIW9 969 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Gpr180Q8BPS4 441 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Tmem132aQ922P8 1018 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ears2Q9CXJ1 523 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 2310002L09RikQ9D7L5 217 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Myl7Q9QVP4 175 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Brca1P48754 1812 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Scn3aA2ASI5 1947 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Zfp984A2A7A2 547 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Mmp15O54732 657 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Zc3h18Q0P678 948 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Otud5Q3U2S4 566 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Pls1Q3V0K9 630 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Pacsin1Q61644 441 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ddx3xQ62167 662 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Zrsr2Q62377 462 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Tlr11Q6R5P0 926 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Actn1Q7TPR4 892 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Bri3bpQ8BXV2 253 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Lca5lQ8C0X0 741 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Plcg2Q8CIH5 1265 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Havcr2Q8VIM0 281 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Bzw2Q91VK1 419 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ppp1r3aQ99MR9 1089 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Mettl16Q9CQG2 553 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ccdc83Q9D4V3 305 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Prg3Q9JL95 222 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Tjp2Q9Z0U1 1167 aaKnown RBP12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ccdc88cQ6VGS5 2009 aa12.39□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Mms22lB1AUR6 1238 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Gm44503E9PYU5 387 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ap1b1O35643 943 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Lmnb2P21619 596 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 FechP22315 420 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Cbx2P30658 519 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Wdr70Q3TWF6 657 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Sh3gl2Q62420 352 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Hdac10Q6P3E7 666 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Spag7Q7TNE3 227 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Bola2Q8BGS2 86 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Fbxo28Q8BIG4 368 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Vmn1r199Q8R280 367 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 CbsQ91WT9 561 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Lrp2bpQ9D4C6 346 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Usp14Q9JMA1 493 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Pex11aQ9Z211 246 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Gm3095E9Q058 166 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Usp17ldG5E8G2 545 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Usp17lcG5E8I7 545 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Pja1O55176 578 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Cd44P15379 778 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Rpl13P47963 211 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ift20Q61025 132 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Kif5bQ61768 963 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 NfrkbQ6PIJ4 1296 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Slc4a8Q8JZR6 1089 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Dcaf8Q8N7N5 591 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Tdrd3Q91W18 743 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Calml4Q91WQ9 153 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Pabpc6Q9D4E6 643 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Nxnl2Q9D531 156 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Eya4Q9Z191 616 aa12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 IkQ9Z1M8 557 aaKnown RBP12.38□□□□□ -0.43
Ddx56-201ENSMUST00000004507 AoahO35298 574 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Il13ra2O88786 383 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 P4hbP09103 509 aaKnown RBP12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Cct5P80316 541 aaKnown RBP12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Arl14Q3SXC5 192 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Dcaf17Q3TUL7 519 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ogfod1Q3U0K8 545 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Hdhd2Q3UGR5 259 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Ccdc84Q4VA36 332 aaKnown RBP12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Atp13a3Q5XF89 1219 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Epha7Q61772 998 aa12.37□□□□□ -0.43
Ddx56-201ENSMUST00000004507 Dync1li2Q6PDL0 492 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms