RNA–Protein interactions for RNA: snR80

snR80, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR80, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR80	snR80	YPL113C	Q02961	396 aa		0.5	□□□□□ -2.33
snR80	snR80	MSC3	Q05812	728 aa		0.5	□□□□□ -2.33
snR80	snR80	SFM1	Q12314	213 aa		0.5	□□□□□ -2.33
snR80	snR80	NCA2	Q12374	616 aa		0.5	□□□□□ -2.33
snR80	snR80	YCR024C-B	Q3E7Z8	88 aa		0.5	□□□□□ -2.33
snR80	snR80	YML133C	Q03099	1374 aa		0.49	□□□□□ -2.33
snR80	snR80	YLL067C	Q07888	1374 aa		0.49	□□□□□ -2.33
snR80	snR80	YLL066C	Q99208	1374 aa		0.49	□□□□□ -2.33
snR80	snR80	CUP2	P15315	225 aa		0.49	□□□□□ -2.33
snR80	snR80	KRE2	P27809	442 aa		0.49	□□□□□ -2.33
snR80	snR80	TOS3	P43637	560 aa		0.49	□□□□□ -2.33
snR80	snR80	MRX6	P48564	524 aa		0.49	□□□□□ -2.33
snR80	snR80	RNH201	P53942	307 aa		0.49	□□□□□ -2.33
snR80	snR80	URH1	Q04179	340 aa		0.49	□□□□□ -2.33
snR80	snR80	CLP1	Q08685	445 aa	Predicted RBP	0.49	□□□□□ -2.33
snR80	snR80	YOR283W	Q12040	230 aa	Known RBP	0.49	□□□□□ -2.33
snR80	snR80	ATG29	Q12092	213 aa		0.49	□□□□□ -2.33
snR80	snR80	MCT1	Q12283	360 aa		0.49	□□□□□ -2.33
snR80	snR80	RHB1	P25378	209 aa		0.48	□□□□□ -2.33
snR80	snR80	DOT5	P40553	215 aa		0.48	□□□□□ -2.33
snR80	snR80	RPS0B	P46654	252 aa	Known RBP	0.48	□□□□□ -2.33
snR80	snR80	SHE4	P51534	789 aa		0.48	□□□□□ -2.33
snR80	snR80	MDM30	Q05930	598 aa		0.48	□□□□□ -2.33
snR80	snR80	OPY2	Q06810	360 aa		0.48	□□□□□ -2.33
snR80	snR80	RKM1	Q08961	583 aa	Predicted RBP	0.48	□□□□□ -2.33
snR80	snR80	YAL067W-A	Q8TGK6	75 aa		0.48	□□□□□ -2.33
snR80	snR80	STE2	D6VTK4	431 aa		0.47	□□□□□ -2.33
snR80	snR80	SCEI	P03882	235 aa		0.47	□□□□□ -2.33
snR80	snR80	PMT1	P33775	817 aa		0.47	□□□□□ -2.33
snR80	snR80	RMD8	P43620	662 aa		0.47	□□□□□ -2.33
snR80	snR80	BUD13	P46947	266 aa	Predicted RBP	0.47	□□□□□ -2.33
snR80	snR80	PHO86	P46956	311 aa		0.47	□□□□□ -2.33
snR80	snR80	FMS1	P50264	508 aa		0.47	□□□□□ -2.33
snR80	snR80	RRP46	P53256	223 aa	Predicted RBP	0.47	□□□□□ -2.33
snR80	snR80	VAC7	P53950	1165 aa		0.47	□□□□□ -2.33
snR80	snR80	SED5	Q01590	340 aa		0.47	□□□□□ -2.33
snR80	snR80	APC4	Q04601	652 aa		0.47	□□□□□ -2.33
snR80	snR80	YHC1	Q05900	231 aa	Known RBP	0.47	□□□□□ -2.33
snR80	snR80	LDS1	P31379	325 aa		0.46	□□□□□ -2.34
snR80	snR80	SOR1	P35497	357 aa	Known RBP	0.46	□□□□□ -2.34
snR80	snR80	KEG1	P43614	200 aa		0.46	□□□□□ -2.34
snR80	snR80	RMI1	Q02685	241 aa		0.46	□□□□□ -2.34
snR80	snR80	SOR2	Q07786	357 aa		0.46	□□□□□ -2.34
snR80	snR80	SEM1	O94742	89 aa		0.45	□□□□□ -2.34
snR80	snR80	RPS18A	P0CX55	146 aa	Known RBP	0.45	□□□□□ -2.34
snR80	snR80	RPS18B	P0CX56	146 aa	Predicted RBP	0.45	□□□□□ -2.34
snR80	snR80	CLB1	P24868	471 aa		0.45	□□□□□ -2.34
snR80	snR80	RSA4	P25382	515 aa	Known RBP	0.45	□□□□□ -2.34
snR80	snR80	YBR241C	P38142	488 aa		0.45	□□□□□ -2.34
snR80	snR80	ECM8	P38246	354 aa		0.45	□□□□□ -2.34
snR80	snR80	IES5	P40060	125 aa		0.45	□□□□□ -2.34
snR80	snR80	CTK3	P46963	296 aa	Predicted RBP	0.45	□□□□□ -2.34
snR80	snR80	ASN2	P49090	572 aa	Known RBP	0.45	□□□□□ -2.34
snR80	snR80	YMR018W	Q04364	514 aa		0.45	□□□□□ -2.34
snR80	snR80	GMC1	Q04399	608 aa		0.45	□□□□□ -2.34
snR80	snR80	RQC1	Q05468	723 aa	Known RBP	0.45	□□□□□ -2.34
snR80	snR80	PEX30	Q06169	523 aa		0.45	□□□□□ -2.34
snR80	snR80	YDL211C	Q12121	372 aa		0.45	□□□□□ -2.34
snR80	snR80	PCL9	Q12477	304 aa		0.45	□□□□□ -2.34
snR80	snR80	CPT1	P17898	393 aa		0.44	□□□□□ -2.34
snR80	snR80	BDH1	P39714	382 aa		0.44	□□□□□ -2.34
snR80	snR80	PCL7	P40186	285 aa		0.44	□□□□□ -2.34
snR80	snR80	REX2	P54964	269 aa	Known RBP	0.44	□□□□□ -2.34
snR80	snR80	YML131W	Q03102	365 aa		0.44	□□□□□ -2.34
snR80	snR80	MMT1	Q03218	510 aa		0.44	□□□□□ -2.34
snR80	snR80	POM152	P39685	1337 aa		0.43	□□□□□ -2.34
snR80	snR80	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	not detected
snR80	snR80	MET2	P08465	486 aa		0.43	□□□□□ -2.34
snR80	snR80	OCA4	P25366	362 aa		0.43	□□□□□ -2.34
snR80	snR80	GEX1	P25596	615 aa		0.43	□□□□□ -2.34
snR80	snR80	PRM1	P53835	661 aa		0.43	□□□□□ -2.34
snR80	snR80	SMD1	Q02260	146 aa	Predicted RBP	0.43	□□□□□ -2.34
snR80	snR80	STD1	Q02794	444 aa		0.43	□□□□□ -2.34
snR80	snR80	MRX11	Q03079	207 aa		0.43	□□□□□ -2.34
snR80	snR80	TDH2	P00358	332 aa	Known RBP	0.42	□□□□□ -2.34
snR80	snR80	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
snR80	snR80	BEM1	P29366	551 aa		0.42	□□□□□ -2.34
snR80	snR80	SPO23	P33757	523 aa		0.42	□□□□□ -2.34
snR80	snR80	YEL057C	P39983	233 aa		0.42	□□□□□ -2.34
snR80	snR80	VPS75	P53853	264 aa		0.42	□□□□□ -2.34
snR80	snR80	VTA1	Q06263	330 aa		0.42	□□□□□ -2.34
snR80	snR80	YPR063C	Q12160	140 aa		0.42	□□□□□ -2.34
snR80	snR80	ATP1	P07251	545 aa	Known RBP	0.41	□□□□□ -2.34
snR80	snR80	PPH22	P23595	377 aa		0.41	□□□□□ -2.34
snR80	snR80	NIP1	P32497	812 aa	Known RBP	0.41	□□□□□ -2.34
snR80	snR80	COS9	P36034	407 aa		0.41	□□□□□ -2.34
snR80	snR80	SHE1	P38200	338 aa		0.41	□□□□□ -2.34
snR80	snR80	RRN10	P38204	145 aa		0.41	□□□□□ -2.34
snR80	snR80	ASP1	P38986	381 aa	Predicted RBP	0.41	□□□□□ -2.34
snR80	snR80	YPL080C	Q02826	108 aa		0.41	□□□□□ -2.34
snR80	snR80	YMR010W	Q03687	405 aa		0.41	□□□□□ -2.34
snR80	snR80	YDR114C	Q04597	100 aa		0.41	□□□□□ -2.34
snR80	snR80	GCN4	P03069	281 aa		0.4	□□□□□ -2.35
snR80	snR80	UNG1	P12887	359 aa		0.4	□□□□□ -2.35
snR80	snR80	COX10	P21592	462 aa		0.4	□□□□□ -2.35
snR80	snR80	GEP4	P38812	185 aa		0.4	□□□□□ -2.35
snR80	snR80	SMC2	P38989	1170 aa	Known RBP	0.4	□□□□□ -2.35
snR80	snR80	YGR015C	P53208	328 aa		0.4	□□□□□ -2.35
snR80	snR80	TRM112	P53738	135 aa	Predicted RBP	0.4	□□□□□ -2.35
snR80	snR80	CSI1	Q04368	295 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms