RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W MSN2P33748 704 aa6.05□□□□□ -1.44
CTF19YPL018W WBP1P33767 430 aaKnown RBP6.05□□□□□ -1.44
CTF19YPL018W AST1P35183 429 aa6.05□□□□□ -1.44
CTF19YPL018W SWH1P35845 1188 aa6.05□□□□□ -1.44
CTF19YPL018W YBR241CP38142 488 aa6.05□□□□□ -1.44
CTF19YPL018W EXO84P38261 753 aa6.05□□□□□ -1.44
CTF19YPL018W TSL1P38427 1098 aaKnown RBP6.05□□□□□ -1.44
CTF19YPL018W MTG2P38860 518 aa6.05□□□□□ -1.44
CTF19YPL018W TAT2P38967 592 aa6.05□□□□□ -1.44
CTF19YPL018W SWD1P39706 426 aa6.05□□□□□ -1.44
CTF19YPL018W YEL020CP39994 560 aa6.05□□□□□ -1.44
CTF19YPL018W TPA1P40032 644 aaKnown RBP6.05□□□□□ -1.44
CTF19YPL018W YJL068CP40363 299 aa6.05□□□□□ -1.44
CTF19YPL018W QDR2P40474 542 aa6.05□□□□□ -1.44
CTF19YPL018W YIL086CP40503 102 aa6.05□□□□□ -1.44
CTF19YPL018W TED1P40533 473 aa6.05□□□□□ -1.44
CTF19YPL018W SPG5P42933 373 aa6.05□□□□□ -1.44
CTF19YPL018W ALR2P43553 858 aa6.05□□□□□ -1.44
CTF19YPL018W ERG13P54839 491 aaKnown RBP6.05□□□□□ -1.44
CTF19YPL018W RSF1Q05043 376 aa6.05□□□□□ -1.44
CTF19YPL018W YDR286CQ05530 114 aa6.05□□□□□ -1.44
CTF19YPL018W SPO77Q06134 477 aa6.05□□□□□ -1.44
CTF19YPL018W NDL1Q06568 189 aa6.05□□□□□ -1.44
CTF19YPL018W WTM1Q12363 437 aaKnown RBP6.05□□□□□ -1.44
CTF19YPL018W PUT2P07275 575 aa6.04□□□□□ -1.44
CTF19YPL018W RPS1BP23248 255 aaKnown RBP6.04□□□□□ -1.44
CTF19YPL018W GRR1P24814 1151 aa6.04□□□□□ -1.44
CTF19YPL018W RER1P25560 188 aa6.04□□□□□ -1.44
CTF19YPL018W MXR2P25566 168 aa6.04□□□□□ -1.44
CTF19YPL018W GDH2P33327 1092 aaKnown RBP6.04□□□□□ -1.44
CTF19YPL018W SPC34P36131 295 aa6.04□□□□□ -1.44
CTF19YPL018W MED8P38304 223 aa6.04□□□□□ -1.44
CTF19YPL018W RSP5P39940 809 aaKnown RBP6.04□□□□□ -1.44
CTF19YPL018W RPS12P48589 143 aaKnown RBP6.04□□□□□ -1.44
CTF19YPL018W UBC9P50623 157 aaPredicted RBP6.04□□□□□ -1.44
CTF19YPL018W MRK1P50873 501 aa6.04□□□□□ -1.44
CTF19YPL018W RMR1P53060 241 aa6.04□□□□□ -1.44
CTF19YPL018W YGR012WP53206 393 aa6.04□□□□□ -1.44
CTF19YPL018W YGR079WP53249 370 aa6.04□□□□□ -1.44
CTF19YPL018W ASI2P53895 289 aa6.04□□□□□ -1.44
CTF19YPL018W SPR6Q01684 191 aa6.04□□□□□ -1.44
CTF19YPL018W TPP1Q03796 238 aa6.04□□□□□ -1.44
CTF19YPL018W RNH1Q04740 348 aa6.04□□□□□ -1.44
CTF19YPL018W DBP9Q06218 594 aaKnown RBP6.04□□□□□ -1.44
CTF19YPL018W SWA2Q06677 668 aa6.04□□□□□ -1.44
CTF19YPL018W REH1Q06709 432 aa6.04□□□□□ -1.44
CTF19YPL018W YEH1Q07804 573 aa6.04□□□□□ -1.44
CTF19YPL018W RRT8Q08219 342 aa6.04□□□□□ -1.44
CTF19YPL018W DCI1Q08558 271 aa6.04□□□□□ -1.44
CTF19YPL018W TY1A-BLQ12266 440 aa6.04□□□□□ -1.44
CTF19YPL018W POL2P21951 2222 aaKnown RBP6.03□□□□□ -1.44
CTF19YPL018W SNF4P12904 322 aa6.03□□□□□ -1.44
CTF19YPL018W URA4P20051 364 aa6.03□□□□□ -1.44
CTF19YPL018W DMC1P25453 334 aa6.03□□□□□ -1.44
CTF19YPL018W KAP122P32767 1081 aa6.03□□□□□ -1.44
CTF19YPL018W ARC19P33204 171 aaKnown RBP6.03□□□□□ -1.44
CTF19YPL018W NUF2P33895 451 aa6.03□□□□□ -1.44
CTF19YPL018W RPS27AP35997 82 aaKnown RBP6.03□□□□□ -1.44
CTF19YPL018W TEF4P36008 412 aaKnown RBP6.03□□□□□ -1.44
CTF19YPL018W TUL1P36096 758 aa6.03□□□□□ -1.44
CTF19YPL018W VPS51P36116 164 aa6.03□□□□□ -1.44
CTF19YPL018W BET3P36149 193 aa6.03□□□□□ -1.44
CTF19YPL018W SLM4P38247 162 aa6.03□□□□□ -1.44
CTF19YPL018W LEU5P38702 357 aa6.03□□□□□ -1.44
CTF19YPL018W RPS27BP38711 82 aa6.03□□□□□ -1.44
CTF19YPL018W BIG1P38813 335 aa6.03□□□□□ -1.44
CTF19YPL018W YHR210CP38893 341 aa6.03□□□□□ -1.44
CTF19YPL018W YGR201CP42936 225 aa6.03□□□□□ -1.44
CTF19YPL018W BNA1P47096 177 aa6.03□□□□□ -1.44
CTF19YPL018W ASK10P48361 1146 aa6.03□□□□□ -1.44
CTF19YPL018W YGR266WP53326 701 aa6.03□□□□□ -1.44
CTF19YPL018W RRN5Q02983 363 aa6.03□□□□□ -1.44
CTF19YPL018W RSC9Q03124 581 aa6.03□□□□□ -1.44
CTF19YPL018W HOT1Q03213 719 aa6.03□□□□□ -1.44
CTF19YPL018W YMR310CQ04867 317 aaPredicted RBP6.03□□□□□ -1.44
CTF19YPL018W YLR346CQ06139 101 aa6.03□□□□□ -1.44
CTF19YPL018W YOL159C-AQ3E769 90 aa6.03□□□□□ -1.44
CTF19YPL018W YIL046W-AQ3E7Z4 54 aa6.03□□□□□ -1.44
CTF19YPL018W GPH1P06738 902 aaKnown RBP6.02□□□□□ -1.45
CTF19YPL018W SUI3P09064 285 aaKnown RBP6.02□□□□□ -1.45
CTF19YPL018W STE4P18851 423 aa6.02□□□□□ -1.45
CTF19YPL018W CLB4P24871 460 aa6.02□□□□□ -1.45
CTF19YPL018W BUD14P27637 709 aa6.02□□□□□ -1.45
CTF19YPL018W RIB1P38066 345 aa6.02□□□□□ -1.45
CTF19YPL018W OSH7P38755 437 aa6.02□□□□□ -1.45
CTF19YPL018W TRR2P38816 342 aa6.02□□□□□ -1.45
CTF19YPL018W VPS52P39904 641 aa6.02□□□□□ -1.45
CTF19YPL018W VMA10P48836 114 aaKnown RBP6.02□□□□□ -1.45
CTF19YPL018W OCA1P50946 238 aaPredicted RBP6.02□□□□□ -1.45
CTF19YPL018W TWF1P53250 332 aa6.02□□□□□ -1.45
CTF19YPL018W RIM13Q03792 727 aa6.02□□□□□ -1.45
CTF19YPL018W YPR091CQ06833 770 aa6.02□□□□□ -1.45
CTF19YPL018W MEU1Q07938 337 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
CTF19YPL018W YOL073CQ08232 322 aa6.02□□□□□ -1.45
CTF19YPL018W PUS7Q08647 676 aaKnown RBP6.02□□□□□ -1.45
CTF19YPL018W VIK1Q12045 647 aa6.02□□□□□ -1.45
CTF19YPL018W TAF3Q12297 353 aa6.02□□□□□ -1.45
CTF19YPL018W SFM1Q12314 213 aa6.02□□□□□ -1.45
CTF19YPL018W FBA1P14540 359 aaKnown RBP6.01□□□□□ -1.45
CTF19YPL018W CTR86P25355 563 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms