RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W VMA16P23968 213 aa1.85□□□□□ -2.11
HER1YOR227W BOS1P25385 244 aa1.85□□□□□ -2.11
HER1YOR227W GSH1P32477 678 aa1.85□□□□□ -2.11
HER1YOR227W YKL097CP34245 136 aa1.85□□□□□ -2.11
HER1YOR227W MRPL10P36520 322 aa1.85□□□□□ -2.11
HER1YOR227W CTP1P38152 299 aa1.85□□□□□ -2.11
HER1YOR227W EFM2P38347 419 aa1.85□□□□□ -2.11
HER1YOR227W SMF2P38778 549 aa1.85□□□□□ -2.11
HER1YOR227W RRP4P38792 359 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W UBA4P38820 440 aa1.85□□□□□ -2.11
HER1YOR227W YHR182WP38870 785 aa1.85□□□□□ -2.11
HER1YOR227W ALP1P38971 573 aa1.85□□□□□ -2.11
HER1YOR227W CCT4P39078 528 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W BDH2P39713 417 aa1.85□□□□□ -2.11
HER1YOR227W LCP5P40079 357 aaPredicted RBP1.85□□□□□ -2.11
HER1YOR227W YRB2P40517 327 aa1.85□□□□□ -2.11
HER1YOR227W SYG1P40528 902 aa1.85□□□□□ -2.11
HER1YOR227W ASN2P49090 572 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W ESBP6P53918 673 aa1.85□□□□□ -2.11
HER1YOR227W SAM50P53969 484 aa1.85□□□□□ -2.11
HER1YOR227W ORC3P54790 616 aa1.85□□□□□ -2.11
HER1YOR227W CDC14Q00684 551 aa1.85□□□□□ -2.11
HER1YOR227W SSY1Q03770 852 aa1.85□□□□□ -2.11
HER1YOR227W YOR365CQ08844 703 aa1.85□□□□□ -2.11
HER1YOR227W LEA1Q08963 238 aaPredicted RBP1.85□□□□□ -2.11
HER1YOR227W YOR029WQ12243 111 aa1.85□□□□□ -2.11
HER1YOR227W YER175W-AQ8TGU4 54 aa1.85□□□□□ -2.11
HER1YOR227W NUM1Q00402 2748 aa1.85□□□□□ -2.11
HER1YOR227W GPA1P08539 472 aa1.84□□□□□ -2.11
HER1YOR227W PMR1P13586 950 aa1.84□□□□□ -2.11
HER1YOR227W PTP1P25044 335 aa1.84□□□□□ -2.11
HER1YOR227W BEM1P29366 551 aa1.84□□□□□ -2.11
HER1YOR227W GDA1P32621 518 aa1.84□□□□□ -2.11
HER1YOR227W SOR1P35497 357 aaKnown RBP1.84□□□□□ -2.11
HER1YOR227W TCM62P38228 572 aaKnown RBP1.84□□□□□ -2.11
HER1YOR227W ANS1P38832 159 aa1.84□□□□□ -2.11
HER1YOR227W GAT2P40209 560 aa1.84□□□□□ -2.11
HER1YOR227W UBP8P50102 471 aa1.84□□□□□ -2.11
HER1YOR227W UBC11P52492 156 aa1.84□□□□□ -2.11
HER1YOR227W YPR003CP53394 754 aa1.84□□□□□ -2.11
HER1YOR227W BUD17P53727 317 aa1.84□□□□□ -2.11
HER1YOR227W NOP13P53883 403 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
HER1YOR227W YDR541CQ03049 344 aa1.84□□□□□ -2.11
HER1YOR227W YMR034CQ05131 434 aaPredicted RBP1.84□□□□□ -2.11
HER1YOR227W CDC123Q05791 360 aa1.84□□□□□ -2.11
HER1YOR227W SOR2Q07786 357 aa1.84□□□□□ -2.11
HER1YOR227W TEN1Q07921 160 aa1.84□□□□□ -2.11
HER1YOR227W LOT6Q07923 191 aa1.84□□□□□ -2.11
HER1YOR227W NRT1Q08485 598 aa1.84□□□□□ -2.11
HER1YOR227W SWM1Q12379 170 aa1.84□□□□□ -2.11
HER1YOR227W ATP1P07251 545 aaKnown RBP1.84□□□□□ -2.11
HER1YOR227W RNR2P09938 399 aaKnown RBP1.84□□□□□ -2.11
HER1YOR227W PEP5P12868 1029 aa1.84□□□□□ -2.11
HER1YOR227W THR4P16120 514 aaKnown RBP1.84□□□□□ -2.11
HER1YOR227W RHB1P25378 209 aa1.84□□□□□ -2.11
HER1YOR227W GBP2P25555 427 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
HER1YOR227W PPZ1P26570 692 aa1.84□□□□□ -2.11
HER1YOR227W CDC15P27636 974 aa1.84□□□□□ -2.11
HER1YOR227W SPR1P32603 445 aa1.84□□□□□ -2.11
HER1YOR227W PTR2P32901 601 aa1.84□□□□□ -2.11
HER1YOR227W ECT1P33412 323 aa1.84□□□□□ -2.11
HER1YOR227W TAF14P35189 244 aa1.84□□□□□ -2.11
HER1YOR227W URA8P38627 578 aaPredicted RBP1.84□□□□□ -2.11
HER1YOR227W YHB1P39676 399 aaKnown RBP1.84□□□□□ -2.11
HER1YOR227W YEL020CP39994 560 aa1.84□□□□□ -2.11
HER1YOR227W PHO86P46956 311 aa1.84□□□□□ -2.11
HER1YOR227W SLT2Q00772 484 aa1.84□□□□□ -2.11
HER1YOR227W NRG1Q03125 231 aa1.84□□□□□ -2.11
HER1YOR227W CTK1Q03957 528 aaKnown RBP1.84□□□□□ -2.11
HER1YOR227W SPO24Q3E752 67 aa1.84□□□□□ -2.11
HER1YOR227W UTP20P35194 2493 aaKnown RBP1.84□□□□□ -2.12
HER1YOR227W SAL1D6W196 494 aa1.84□□□□□ -2.12
HER1YOR227W SUC2P00724 532 aa1.84□□□□□ -2.12
HER1YOR227W RAD52P06778 471 aaKnown RBP1.84□□□□□ -2.12
HER1YOR227W MET3P08536 511 aa1.84□□□□□ -2.12
HER1YOR227W RPL18AP0CX49 186 aaKnown RBP1.84□□□□□ -2.12
HER1YOR227W RPL18BP0CX50 186 aaKnown RBP1.84□□□□□ -2.12
HER1YOR227W ACH1P32316 526 aa1.84□□□□□ -2.12
HER1YOR227W ATP11P32453 318 aa1.84□□□□□ -2.12
HER1YOR227W MEI5P32489 222 aa1.84□□□□□ -2.12
HER1YOR227W AIM29P36154 155 aa1.84□□□□□ -2.12
HER1YOR227W FET3P38993 636 aa1.84□□□□□ -2.12
HER1YOR227W SAS2P40963 338 aa1.84□□□□□ -2.12
HER1YOR227W FAR3P46671 204 aa1.84□□□□□ -2.12
HER1YOR227W SPT20P50875 604 aa1.84□□□□□ -2.12
HER1YOR227W TDA7P53882 636 aaPredicted RBP1.84□□□□□ -2.12
HER1YOR227W NUP116Q02630 1113 aa1.84□□□□□ -2.12
HER1YOR227W SLD5Q03406 294 aa1.84□□□□□ -2.12
HER1YOR227W RSM24Q03976 319 aa1.84□□□□□ -2.12
HER1YOR227W GIM5Q04493 163 aa1.84□□□□□ -2.12
HER1YOR227W NAT4Q04751 285 aa1.84□□□□□ -2.12
HER1YOR227W DDP1Q99321 188 aaKnown RBP1.84□□□□□ -2.12
HER1YOR227W RPS3P05750 240 aaKnown RBP1.83□□□□□ -2.12
HER1YOR227W GPH1P06738 902 aaKnown RBP1.83□□□□□ -2.12
HER1YOR227W RHO1P06780 209 aaKnown RBP1.83□□□□□ -2.12
HER1YOR227W RPL12AP0CX53 165 aaKnown RBP1.83□□□□□ -2.12
HER1YOR227W RPL12BP0CX54 165 aa1.83□□□□□ -2.12
HER1YOR227W YPK1P12688 680 aaKnown RBP1.83□□□□□ -2.12
HER1YOR227W DBR1P24309 405 aaKnown RBP1.83□□□□□ -2.12
HER1YOR227W RPS2P25443 254 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms