RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SUC2	P00724	532 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	HAP2	P06774	265 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	GPA2	P10823	449 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.42	□□□□□ -1.86	not detected
TPM1	YNL079C	URA10	P30402	227 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	TKL2	P33315	681 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	BNA4	P38169	460 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	HSM3	P38348	480 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	RRP3	P38712	501 aa	Known RBP	3.42	□□□□□ -1.86
TPM1	YNL079C	PRM9	P39551	298 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	YJL068C	P40363	299 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	DIM1	P41819	318 aa	Known RBP	3.42	□□□□□ -1.86
TPM1	YNL079C	STB2	P46679	850 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	TMA22	P47089	198 aa	Predicted RBP	3.42	□□□□□ -1.86
TPM1	YNL079C	SRB7	P47822	140 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	BIO4	P53630	237 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	KTR6	P54070	446 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	VPS9	P54787	451 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	AIM32	Q04689	311 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	YET3	Q07451	203 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	DDC1	Q08949	612 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	GPM2	Q12008	311 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	ATG29	Q12092	213 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	YDL007C-A	Q2V2Q0	85 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	YDR524C-B	Q3E6R4	66 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	RIF1	P29539	1916 aa		3.42	□□□□□ -1.86
TPM1	YNL079C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
TPM1	YNL079C	COR1	P07256	457 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	RNA1	P11745	407 aa	Known RBP	3.41	□□□□□ -1.86
TPM1	YNL079C	APE1	P14904	514 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	SEC62	P21825	274 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	SEC66	P33754	206 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	PMT1	P33775	817 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	COY1	P34237	679 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	GCS1	P35197	352 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	YNK1	P36010	153 aa	Known RBP	3.41	□□□□□ -1.86
TPM1	YNL079C	CMC1	P36064	111 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	UIP5	P36137	443 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	OTU2	P38747	307 aa	Known RBP	3.41	□□□□□ -1.86
TPM1	YNL079C	MBB1	P39534	108 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	YAT2	P40017	923 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	MEP2	P41948	499 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	YLR177W	Q06251	628 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	AAD15	Q08361	143 aa		3.41	□□□□□ -1.86
TPM1	YNL079C	EFG1	Q3E705	233 aa	Known RBP	3.41	□□□□□ -1.86
TPM1	YNL079C	RAD3	P06839	778 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	RPL31B	P0C2H9	113 aa	Known RBP	3.4	□□□□□ -1.87
TPM1	YNL079C	MRS3	P10566	314 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	MET16	P18408	261 aa	Predicted RBP	3.4	□□□□□ -1.87
TPM1	YNL079C	YCL068C	P25593	260 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	RPC19	P28000	142 aa	Known RBP	3.4	□□□□□ -1.87
TPM1	YNL079C	RIM1	P32445	135 aa	Known RBP	3.4	□□□□□ -1.87
TPM1	YNL079C	SMI1	P32566	505 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	TOA1	P32773	286 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	MSN2	P33748	704 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	PEX5	P35056	612 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	HMT1	P38074	348 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	SLX1	P38324	304 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	RFC3	P38629	340 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	FHL1	P39521	936 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	VPS52	P39904	641 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	YEL028W	P39989	153 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	PEP8	P40335	379 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	YJL070C	P40361	888 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	YFL012W	P43580	148 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	YJL132W	P47014	750 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	RCF2	P53721	224 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	RPM2	Q02773	1202 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	SPG3	Q04398	127 aa	Predicted RBP	3.4	□□□□□ -1.87
TPM1	YNL079C	GRX8	Q05926	109 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	BNA5	Q05979	453 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	SPE3	Q12074	293 aa	Known RBP	3.4	□□□□□ -1.87
TPM1	YNL079C	DAP1	Q12091	152 aa		3.4	□□□□□ -1.87
TPM1	YNL079C	NOT5	Q12514	560 aa	Predicted RBP	3.4	□□□□□ -1.87
TPM1	YNL079C	HIS1	P00498	297 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	ATP1	P07251	545 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
TPM1	YNL079C	RED1	P14291	827 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	AMD1	P15274	810 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	EXO70	P19658	623 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	YCR007C	P25354	239 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	ERG3	P32353	365 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	VPH1	P32563	840 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	SSE1	P32589	693 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	CYM1	P32898	989 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	SIP2	P34164	415 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	YBR056W	P38081	501 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	PHO89	P38361	574 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	ATM1	P40416	690 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	HXT14	P42833	540 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	IKS1	P47042	667 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	ILM1	P47155	203 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	RLI1	Q03195	608 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	YMR209C	Q03648	457 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	ENT5	Q03769	411 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	FMN1	Q03778	218 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	YMR317W	Q04893	1140 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	RQC1	Q05468	723 aa	Known RBP	3.39	□□□□□ -1.87
TPM1	YNL079C	CDC123	Q05791	360 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	SYO1	Q07395	620 aa		3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms