RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W YMR155WQ03795 547 aa2.3□□□□□ -2.04
UBP15YMR304W CAC2Q04199 468 aa2.3□□□□□ -2.04
UBP15YMR304W CTS2Q06350 511 aa2.3□□□□□ -2.04
UBP15YMR304W CDA1Q06702 301 aa2.3□□□□□ -2.04
UBP15YMR304W RRT8Q08219 342 aa2.3□□□□□ -2.04
UBP15YMR304W REX4Q08237 289 aa2.3□□□□□ -2.04
UBP15YMR304W VHS3Q08438 674 aa2.3□□□□□ -2.04
UBP15YMR304W RGT2Q12300 763 aa2.3□□□□□ -2.04
UBP15YMR304W APM4Q99186 491 aa2.3□□□□□ -2.04
UBP15YMR304W BIK1P11709 440 aa2.3□□□□□ -2.04
UBP15YMR304W CLN3P13365 580 aa2.3□□□□□ -2.04
UBP15YMR304W POL30P15873 258 aaKnown RBP2.3□□□□□ -2.04
UBP15YMR304W COX10P21592 462 aa2.3□□□□□ -2.04
UBP15YMR304W DAL82P21705 255 aa2.3□□□□□ -2.04
UBP15YMR304W DAL80P26343 269 aa2.3□□□□□ -2.04
UBP15YMR304W MSS1P32559 526 aaPredicted RBP2.3□□□□□ -2.04
UBP15YMR304W YHL008CP38750 627 aa2.3□□□□□ -2.04
UBP15YMR304W PLB1P39105 664 aa2.3□□□□□ -2.04
UBP15YMR304W PRP39P39682 629 aaKnown RBP2.3□□□□□ -2.04
UBP15YMR304W ASN1P49089 572 aaKnown RBP2.3□□□□□ -2.04
UBP15YMR304W MPS1P54199 764 aa2.3□□□□□ -2.04
UBP15YMR304W GPN3Q06543 272 aa2.3□□□□□ -2.04
UBP15YMR304W FMP40Q08968 688 aaPredicted RBP2.3□□□□□ -2.04
UBP15YMR304W YDR018CQ12185 396 aa2.3□□□□□ -2.04
UBP15YMR304W RTN2Q12443 393 aa2.3□□□□□ -2.04
UBP15YMR304W YIR021W-AQ3E739 70 aa2.3□□□□□ -2.04
UBP15YMR304W YIL046W-AQ3E7Z4 54 aa2.3□□□□□ -2.04
UBP15YMR304W ISD11Q6Q560 94 aa2.3□□□□□ -2.04
UBP15YMR304W KIN28P06242 306 aa2.3□□□□□ -2.04
UBP15YMR304W ATG22P25568 528 aa2.3□□□□□ -2.04
UBP15YMR304W STO1P34160 861 aaKnown RBP2.3□□□□□ -2.04
UBP15YMR304W YKL102CP34249 101 aa2.3□□□□□ -2.04
UBP15YMR304W FES1P38260 290 aa2.3□□□□□ -2.04
UBP15YMR304W HSE1P38753 452 aa2.3□□□□□ -2.04
UBP15YMR304W SPF1P39986 1215 aaKnown RBP2.3□□□□□ -2.04
UBP15YMR304W PFA3P42836 336 aa2.3□□□□□ -2.04
UBP15YMR304W TPN1P53099 579 aa2.3□□□□□ -2.04
UBP15YMR304W ERP6P53198 216 aa2.3□□□□□ -2.04
UBP15YMR304W SNO1Q03144 224 aa2.3□□□□□ -2.04
UBP15YMR304W TRS130Q03660 1102 aa2.3□□□□□ -2.04
UBP15YMR304W ADI1Q03677 179 aa2.3□□□□□ -2.04
UBP15YMR304W YMR010WQ03687 405 aa2.3□□□□□ -2.04
UBP15YMR304W RKM2Q03942 479 aa2.3□□□□□ -2.04
UBP15YMR304W YPL191CQ08930 360 aa2.3□□□□□ -2.04
UBP15YMR304W ATX2Q12067 313 aa2.3□□□□□ -2.04
UBP15YMR304W AGC1Q12482 902 aa2.3□□□□□ -2.04
UBP15YMR304W TMA7Q3E764 64 aaKnown RBP2.3□□□□□ -2.04
UBP15YMR304W YOS9Q99220 542 aa2.3□□□□□ -2.04
UBP15YMR304W Q0144Q9ZZW2 109 aa2.3□□□□□ -2.04
UBP15YMR304W GLT1Q12680 2145 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W HXK2P04807 486 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W ABF1P14164 731 aa2.29□□□□□ -2.04
UBP15YMR304W OM45P16547 393 aa2.29□□□□□ -2.04
UBP15YMR304W SAT4P25333 603 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W YCL042WP25572 119 aa2.29□□□□□ -2.04
UBP15YMR304W PEX34P25584 144 aa2.29□□□□□ -2.04
UBP15YMR304W PRE4P30657 266 aa2.29□□□□□ -2.04
UBP15YMR304W DBF20P32328 564 aa2.29□□□□□ -2.04
UBP15YMR304W PRX1P34227 261 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W SDS22P36047 338 aa2.29□□□□□ -2.04
UBP15YMR304W RPN3P40016 523 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W RRG9P40156 214 aa2.29□□□□□ -2.04
UBP15YMR304W GDS1P41913 522 aa2.29□□□□□ -2.04
UBP15YMR304W CAF16P43569 289 aa2.29□□□□□ -2.04
UBP15YMR304W YHC3P47040 408 aa2.29□□□□□ -2.04
UBP15YMR304W HOC1P47124 396 aa2.29□□□□□ -2.04
UBP15YMR304W ZPR1P53303 486 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W YPR003CP53394 754 aa2.29□□□□□ -2.04
UBP15YMR304W CPR6P53691 371 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W ARK1P53974 638 aa2.29□□□□□ -2.04
UBP15YMR304W YPL071CQ02864 156 aa2.29□□□□□ -2.04
UBP15YMR304W RIM13Q03792 727 aa2.29□□□□□ -2.04
UBP15YMR304W BNA7Q04066 261 aa2.29□□□□□ -2.04
UBP15YMR304W FRQ1Q06389 190 aa2.29□□□□□ -2.04
UBP15YMR304W YAP7Q08182 245 aa2.29□□□□□ -2.04
UBP15YMR304W HER1Q12276 1246 aa2.29□□□□□ -2.04
UBP15YMR304W YOR019WQ99248 730 aa2.29□□□□□ -2.04
UBP15YMR304W SSA3P09435 649 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W YGL041W-AP0C5N3 154 aa2.29□□□□□ -2.04
UBP15YMR304W RPL4AP10664 362 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W EPT1P22140 391 aa2.29□□□□□ -2.04
UBP15YMR304W PET309P32522 965 aaPredicted RBP2.29□□□□□ -2.04
UBP15YMR304W TMT1P32643 299 aa2.29□□□□□ -2.04
UBP15YMR304W YKR051WP36142 418 aa2.29□□□□□ -2.04
UBP15YMR304W GLG1P36143 616 aa2.29□□□□□ -2.04
UBP15YMR304W DTR1P38125 572 aa2.29□□□□□ -2.04
UBP15YMR304W TAT2P38967 592 aa2.29□□□□□ -2.04
UBP15YMR304W FLC2P39719 783 aa2.29□□□□□ -2.04
UBP15YMR304W YER010CP40011 234 aa2.29□□□□□ -2.04
UBP15YMR304W GID8P40208 455 aa2.29□□□□□ -2.04
UBP15YMR304W YIL161WP40449 235 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W PAC11P40960 533 aa2.29□□□□□ -2.04
UBP15YMR304W COS4P43542 379 aa2.29□□□□□ -2.04
UBP15YMR304W COS5P47187 383 aa2.29□□□□□ -2.04
UBP15YMR304W SRB7P47822 140 aa2.29□□□□□ -2.04
UBP15YMR304W RPL4BP49626 362 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W NSA1P53136 463 aaPredicted RBP2.29□□□□□ -2.04
UBP15YMR304W COS1P53822 381 aa2.29□□□□□ -2.04
UBP15YMR304W PRP38Q00723 242 aaPredicted RBP2.29□□□□□ -2.04
UBP15YMR304W YPL107WQ02873 248 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms