RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W TY1B-MR1Q04214 1755 aa2.11□□□□□ -2.07
PKR1YMR123W TY1B-MR2Q04670 1755 aaKnown RBP2.11□□□□□ -2.07
PKR1YMR123W TY1B-LR1Q12088 1755 aaKnown RBP2.11□□□□□ -2.07
PKR1YMR123W TY1B-NL1Q12112 1755 aa2.11□□□□□ -2.07
PKR1YMR123W TY1B-GR1Q12141 1755 aa2.11□□□□□ -2.07
PKR1YMR123W TY1B-BLQ12490 1755 aa2.11□□□□□ -2.07
PKR1YMR123W INH1P01097 85 aa2.11□□□□□ -2.07
PKR1YMR123W DPH5P32469 300 aaPredicted RBP2.11□□□□□ -2.07
PKR1YMR123W OM14P38325 134 aa2.11□□□□□ -2.07
PKR1YMR123W PTI1P39927 425 aaPredicted RBP2.11□□□□□ -2.07
PKR1YMR123W BNI5P53890 448 aaKnown RBP2.11□□□□□ -2.07
PKR1YMR123W OCA2P53949 197 aa2.11□□□□□ -2.07
PKR1YMR123W STD1Q02794 444 aa2.11□□□□□ -2.07
PKR1YMR123W YMR102CQ03177 834 aa2.11□□□□□ -2.07
PKR1YMR123W MMT1Q03218 510 aa2.11□□□□□ -2.07
PKR1YMR123W SMC5Q08204 1093 aa2.11□□□□□ -2.07
PKR1YMR123W DNL4Q08387 944 aaPredicted RBP2.11□□□□□ -2.07
PKR1YMR123W RUP1Q12242 671 aa2.11□□□□□ -2.07
PKR1YMR123W CEX1Q12453 761 aa2.11□□□□□ -2.07
PKR1YMR123W IQG1Q12280 1495 aa2.11□□□□□ -2.07
PKR1YMR123W PSK1P31374 1356 aa2.1□□□□□ -2.07
PKR1YMR123W PDR10P51533 1564 aa2.1□□□□□ -2.07
PKR1YMR123W CAP2P13517 287 aa2.1□□□□□ -2.07
PKR1YMR123W EXG1P23776 448 aaKnown RBP2.1□□□□□ -2.07
PKR1YMR123W ANR2P36090 516 aaPredicted RBP2.1□□□□□ -2.07
PKR1YMR123W YHK8P38776 514 aa2.1□□□□□ -2.07
PKR1YMR123W SEO1P39709 593 aa2.1□□□□□ -2.07
PKR1YMR123W YER186CP40101 306 aa2.1□□□□□ -2.07
PKR1YMR123W MAM33P40513 266 aa2.1□□□□□ -2.07
PKR1YMR123W EGT2P42835 1041 aa2.1□□□□□ -2.07
PKR1YMR123W ATG18P43601 500 aa2.1□□□□□ -2.07
PKR1YMR123W AIM24P47127 394 aa2.1□□□□□ -2.07
PKR1YMR123W CLD1P53264 445 aa2.1□□□□□ -2.07
PKR1YMR123W CRH1P53301 507 aa2.1□□□□□ -2.07
PKR1YMR123W YET2Q04210 160 aa2.1□□□□□ -2.07
PKR1YMR123W LIP2Q06005 328 aa2.1□□□□□ -2.07
PKR1YMR123W MMR1Q06324 491 aa2.1□□□□□ -2.07
PKR1YMR123W LOT6Q07923 191 aa2.1□□□□□ -2.07
PKR1YMR123W NCA2Q12374 616 aa2.1□□□□□ -2.07
PKR1YMR123W EAF3Q12432 401 aa2.1□□□□□ -2.07
PKR1YMR123W MTR10Q99189 972 aa2.1□□□□□ -2.07
PKR1YMR123W AFI1Q99222 893 aa2.1□□□□□ -2.07
PKR1YMR123W PDR12Q02785 1511 aa2.1□□□□□ -2.07
PKR1YMR123W NUP157P40064 1391 aaKnown RBP2.1□□□□□ -2.07
PKR1YMR123W PDR15Q04182 1529 aaKnown RBP2.09□□□□□ -2.07
PKR1YMR123W GDB1Q06625 1536 aa2.09□□□□□ -2.07
PKR1YMR123W COX4P04037 155 aa2.09□□□□□ -2.07
PKR1YMR123W CDC50P25656 391 aa2.09□□□□□ -2.07
PKR1YMR123W ADK2P26364 225 aa2.09□□□□□ -2.07
PKR1YMR123W URA7P28274 579 aaKnown RBP2.09□□□□□ -2.07
PKR1YMR123W TFB1P32776 642 aa2.09□□□□□ -2.07
PKR1YMR123W BYE1P36106 594 aa2.09□□□□□ -2.07
PKR1YMR123W JNM1P36224 373 aa2.09□□□□□ -2.07
PKR1YMR123W MRPS9P38120 278 aa2.09□□□□□ -2.07
PKR1YMR123W SLM4P38247 162 aa2.09□□□□□ -2.07
PKR1YMR123W ALD5P40047 520 aaKnown RBP2.09□□□□□ -2.07
PKR1YMR123W GAT2P40209 560 aa2.09□□□□□ -2.07
PKR1YMR123W HAC1P41546 238 aa2.09□□□□□ -2.07
PKR1YMR123W CAK1P43568 368 aaPredicted RBP2.09□□□□□ -2.07
PKR1YMR123W TOS3P43637 560 aa2.09□□□□□ -2.07
PKR1YMR123W LCB3P47013 409 aa2.09□□□□□ -2.07
PKR1YMR123W COS1P53822 381 aa2.09□□□□□ -2.07
PKR1YMR123W MRPS16Q02608 121 aa2.09□□□□□ -2.07
PKR1YMR123W HOT1Q03213 719 aa2.09□□□□□ -2.07
PKR1YMR123W TDA1Q03533 586 aa2.09□□□□□ -2.07
PKR1YMR123W ECM11Q04110 302 aa2.09□□□□□ -2.07
PKR1YMR123W PRM6Q04705 352 aa2.09□□□□□ -2.07
PKR1YMR123W YPQ1Q12010 308 aa2.09□□□□□ -2.07
PKR1YMR123W RRG1Q12167 365 aaPredicted RBP2.09□□□□□ -2.07
PKR1YMR123W PIS1P06197 220 aaKnown RBP2.08□□□□□ -2.08
PKR1YMR123W CBP6P07253 162 aaPredicted RBP2.08□□□□□ -2.08
PKR1YMR123W PRB1P09232 635 aa2.08□□□□□ -2.08
PKR1YMR123W FUR1P18562 216 aaKnown RBP2.08□□□□□ -2.08
PKR1YMR123W IES6P32617 166 aa2.08□□□□□ -2.08
PKR1YMR123W CHS6P40955 746 aa2.08□□□□□ -2.08
PKR1YMR123W MKC7P53379 596 aa2.08□□□□□ -2.08
PKR1YMR123W ALF1P53904 254 aa2.08□□□□□ -2.08
PKR1YMR123W PRP42Q03776 544 aaKnown RBP2.08□□□□□ -2.08
PKR1YMR123W YDR131CQ03899 556 aa2.08□□□□□ -2.08
PKR1YMR123W MFG1Q07684 458 aa2.08□□□□□ -2.08
PKR1YMR123W STH1P32597 1359 aa2.08□□□□□ -2.08
PKR1YMR123W DNF3Q12674 1656 aa2.07□□□□□ -2.08
PKR1YMR123W YEF1P32622 495 aa2.07□□□□□ -2.08
PKR1YMR123W MPE1P35728 441 aaKnown RBP2.07□□□□□ -2.08
PKR1YMR123W ASC1P38011 319 aaKnown RBP2.07□□□□□ -2.08
PKR1YMR123W OLA1P38219 394 aaKnown RBP2.07□□□□□ -2.08
PKR1YMR123W VHS2P40463 436 aa2.07□□□□□ -2.08
PKR1YMR123W SKI8Q02793 397 aaPredicted RBP2.07□□□□□ -2.08
PKR1YMR123W IES4Q08561 116 aa2.07□□□□□ -2.08
PKR1YMR123W NAG1Q8TGN9 163 aa2.07□□□□□ -2.08
PKR1YMR123W ARO1P08566 1588 aaKnown RBP2.06□□□□□ -2.08
PKR1YMR123W PAB1P04147 577 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08 RIP-Chip
PKR1YMR123W ARO3P14843 370 aaKnown RBP2.06□□□□□ -2.08
PKR1YMR123W CYS4P32582 507 aaKnown RBP2.06□□□□□ -2.08
PKR1YMR123W GPI18P38211 433 aa2.06□□□□□ -2.08
PKR1YMR123W STN1P38960 494 aa2.06□□□□□ -2.08
PKR1YMR123W YER079WP40052 210 aaKnown RBP2.06□□□□□ -2.08
PKR1YMR123W PGU1P47180 361 aa2.06□□□□□ -2.08
PKR1YMR123W YPS5P53057 165 aa2.06□□□□□ -2.08
PKR1YMR123W ERB1Q04660 807 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms