RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	ATP10	P18496	279 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	YCR061W	P25639	631 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	DAD2	P36162	133 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	MRPL4	P36517	319 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	STB2	P46679	850 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	GCD14	P46959	383 aa	Predicted RBP	1.19	□□□□□ -2.22
CLU1	YMR012W	YJR030C	P47101	745 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	COG2	P53271	262 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	WSC2	P53832	503 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	RPL6A	Q02326	176 aa	Known RBP	1.19	□□□□□ -2.22
CLU1	YMR012W	SLD5	Q03406	294 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	SNU56	Q03782	492 aa	Known RBP	1.19	□□□□□ -2.22
CLU1	YMR012W	PLP2	Q12017	286 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	YDL211C	Q12121	372 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	RRP12	Q12754	1228 aa	Known RBP	1.19	□□□□□ -2.22
CLU1	YMR012W	APM4	Q99186	491 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	CCH1	P50077	2039 aa		1.19	□□□□□ -2.22
CLU1	YMR012W	RAD52	P06778	471 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	BIK1	P11709	440 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	YAP1	P19880	650 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	PTC6	P25646	442 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	FUN19	P28003	413 aa	Predicted RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	SRB5	P32585	307 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	SSE2	P32590	693 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	NUP133	P36161	1157 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	APL3	P38065	1025 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	YBR259W	P38338	688 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	YER186C	P40101	306 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	SEC27	P41811	889 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	MUB1	Q03162	620 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	PRM15	Q03262	622 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	IZH1	Q03419	316 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	YDR209C	Q03480	137 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	YSH1	Q06224	779 aa	Predicted RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	YLR179C	Q06252	201 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	SEC63	P14906	663 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	SAC6	P32599	642 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	LIN1	P38852	340 aa	Predicted RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	CTF8	P38877	133 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	VPS52	P39904	641 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	PCL6	P40038	420 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	BTT1	P40314	149 aa	Predicted RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	SYG1	P40528	902 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	YFL015C	P43578	164 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	ALK1	P43633	760 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	ARC1	P46672	376 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	YJL163C	P46996	555 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	DLT1	Q04216	342 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	ADH6	Q04894	360 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	RRP45	Q05636	305 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	STE23	Q06010	1027 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	RKI1	Q12189	258 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	INP53	Q12271	1107 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	UTP20	P35194	2493 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	ALG7	P07286	448 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	TFS1	P14306	219 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	UGA1	P17649	471 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	PDE1	P22434	369 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	RAD14	P28519	371 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	SRB4	P32569	687 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	OSH3	P38713	996 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	SPC97	P38863	823 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	VPS45	P38932	577 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	STN1	P38960	494 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	DHH1	P39517	506 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	RAD17	P48581	401 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	SPR6	Q01684	191 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	SHR3	Q02774	210 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	RIM13	Q03792	727 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	ATC1	Q04005	294 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	ADE13	Q05911	482 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	ARR3	Q06598	404 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	CYK3	Q07533	885 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	YDL242W	Q07746	117 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	RTT109	Q07794	436 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	NOP12	Q08208	459 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	LDS2	Q08218	356 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	BRX1	Q08235	291 aa	Known RBP	1.18	□□□□□ -2.22
CLU1	YMR012W	UAF30	Q08747	228 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	SFI1	Q12369	946 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	TAD3	Q9URQ3	322 aa		1.18	□□□□□ -2.22
CLU1	YMR012W	MRPL8	P22353	238 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	VPS3	P23643	1011 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	SRB2	P34162	210 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	MTR2	P34232	184 aa	Known RBP	1.17	□□□□□ -2.22
CLU1	YMR012W	BMH2	P34730	273 aa	Known RBP	1.17	□□□□□ -2.22
CLU1	YMR012W	TVP38	P36164	337 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	YCR041W	P37265	110 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	SIP3	P38717	1229 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	PIH1	P38768	344 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	RIX1	P38883	763 aa	Predicted RBP	1.17	□□□□□ -2.22
CLU1	YMR012W	FHL1	P39521	936 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	HXT9	P40885	567 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	IBA57	P47158	497 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.17	□□□□□ -2.22	not detected
CLU1	YMR012W	SWS2	P53937	143 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	ARK1	P53974	638 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	HXT11	P54862	567 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	YPL113C	Q02961	396 aa		1.17	□□□□□ -2.22
CLU1	YMR012W	YMR178W	Q03219	274 aa	Known RBP	1.17	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms