RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A YFL066CP43538 392 aa11.82□□□□□ -0.52
LSM3YLR438C-A RPL17BP46990 184 aaKnown RBP11.82□□□□□ -0.52
LSM3YLR438C-A NBA1Q08229 501 aaKnown RBP11.82□□□□□ -0.52
LSM3YLR438C-A MMP1Q12372 583 aa11.82□□□□□ -0.52
LSM3YLR438C-A MRX4Q12467 430 aa11.82□□□□□ -0.52
LSM3YLR438C-A SEC2P17065 759 aa11.81□□□□□ -0.52
LSM3YLR438C-A PEP12P32854 288 aa11.81□□□□□ -0.52
LSM3YLR438C-A TOD6P34219 525 aa11.81□□□□□ -0.52
LSM3YLR438C-A LST4P34239 828 aa11.81□□□□□ -0.52
LSM3YLR438C-A YJR141WP47172 347 aaPredicted RBP11.81□□□□□ -0.52
LSM3YLR438C-A MTQ1P53944 314 aa11.81□□□□□ -0.52
LSM3YLR438C-A TRS23Q03784 219 aa11.81□□□□□ -0.52
LSM3YLR438C-A ENT2Q05785 613 aa11.81□□□□□ -0.52
LSM3YLR438C-A ARO10Q06408 635 aa11.81□□□□□ -0.52
LSM3YLR438C-A YPR097WQ06839 1073 aa11.81□□□□□ -0.52
LSM3YLR438C-A LOT6Q07923 191 aa11.81□□□□□ -0.52
LSM3YLR438C-A REX3Q12090 404 aa11.81□□□□□ -0.52
LSM3YLR438C-A HFA1P32874 2273 aa11.81□□□□□ -0.52
LSM3YLR438C-A BRR2P32639 2163 aaKnown RBP11.8□□□□□ -0.52
LSM3YLR438C-A THR1P17423 357 aaKnown RBP11.8□□□□□ -0.52
LSM3YLR438C-A MCK1P21965 375 aaKnown RBP11.8□□□□□ -0.52
LSM3YLR438C-A GPI12P23797 304 aa11.8□□□□□ -0.52
LSM3YLR438C-A POL4P25615 582 aa11.8□□□□□ -0.52
LSM3YLR438C-A PMT2P31382 759 aa11.8□□□□□ -0.52
LSM3YLR438C-A RIM101P33400 625 aa11.8□□□□□ -0.52
LSM3YLR438C-A HCS1P34243 683 aa11.8□□□□□ -0.52
LSM3YLR438C-A YAR028WP39548 234 aa11.8□□□□□ -0.52
LSM3YLR438C-A TPC1P53257 314 aa11.8□□□□□ -0.52
LSM3YLR438C-A RPS21BQ3E754 87 aaKnown RBP11.8□□□□□ -0.52
LSM3YLR438C-A YSF3P0C074 85 aaPredicted RBP11.79□□□□□ -0.52
LSM3YLR438C-A GLK1P17709 500 aaKnown RBP11.79□□□□□ -0.52
LSM3YLR438C-A NAR1P23503 491 aaKnown RBP11.79□□□□□ -0.52
LSM3YLR438C-A RPN2P32565 945 aaKnown RBP11.79□□□□□ -0.52
LSM3YLR438C-A EXO84P38261 753 aa11.79□□□□□ -0.52
LSM3YLR438C-A SNM1P40993 198 aa11.79□□□□□ -0.52
LSM3YLR438C-A TPS1Q00764 495 aaKnown RBP11.79□□□□□ -0.52
LSM3YLR438C-A HOP09932 586 aa11.78□□□□□ -0.52
LSM3YLR438C-A SPC42P36094 363 aa11.78□□□□□ -0.52
LSM3YLR438C-A CAK1P43568 368 aaPredicted RBP11.78□□□□□ -0.52
LSM3YLR438C-A YJR115WP47152 169 aa11.78□□□□□ -0.52
LSM3YLR438C-A DCP2P53550 970 aaKnown RBP11.78□□□□□ -0.52
LSM3YLR438C-A YOR214CQ12282 236 aa11.78□□□□□ -0.52
LSM3YLR438C-A COX1P00401 534 aa11.77□□□□□ -0.53
LSM3YLR438C-A RPP2BP02400 110 aaKnown RBP11.77□□□□□ -0.53
LSM3YLR438C-A YCK1P23291 538 aa11.77□□□□□ -0.53
LSM3YLR438C-A GSH1P32477 678 aa11.77□□□□□ -0.53
LSM3YLR438C-A MRPL6P32904 214 aa11.77□□□□□ -0.53
LSM3YLR438C-A YER158CP40095 573 aa11.77□□□□□ -0.53
LSM3YLR438C-A YGR067CP53243 804 aa11.77□□□□□ -0.53
LSM3YLR438C-A YGR168CP53293 376 aa11.77□□□□□ -0.53
LSM3YLR438C-A DBP6P53734 629 aaKnown RBP11.77□□□□□ -0.53
LSM3YLR438C-A SWP1Q02795 286 aa11.77□□□□□ -0.53
LSM3YLR438C-A PEX25Q02969 394 aa11.77□□□□□ -0.53
LSM3YLR438C-A BDS1Q08347 646 aa11.77□□□□□ -0.53
LSM3YLR438C-A PSF1Q12488 208 aa11.77□□□□□ -0.53
LSM3YLR438C-A YPT1P01123 206 aaKnown RBP11.76□□□□□ -0.53
LSM3YLR438C-A RPL20AP0CX23 172 aaKnown RBP11.76□□□□□ -0.53
LSM3YLR438C-A RPL20BP0CX24 172 aaPredicted RBP11.76□□□□□ -0.53
LSM3YLR438C-A ASF2P32448 525 aaPredicted RBP11.76□□□□□ -0.53
LSM3YLR438C-A GVP36P40531 326 aaKnown RBP11.76□□□□□ -0.53
LSM3YLR438C-A BNA3P47039 444 aaKnown RBP11.76□□□□□ -0.53
LSM3YLR438C-A NUP57P48837 541 aa11.76□□□□□ -0.53
LSM3YLR438C-A YMR210WQ03649 449 aa11.76□□□□□ -0.53
LSM3YLR438C-A VPS36Q06696 566 aa11.76□□□□□ -0.53
LSM3YLR438C-A RIP1P08067 215 aa11.75□□□□□ -0.53
LSM3YLR438C-A FAR1P21268 830 aa11.75□□□□□ -0.53
LSM3YLR438C-A IDH1P28834 360 aaKnown RBP RIP-Chip data11.75□□□□□ -0.53not detected
LSM3YLR438C-A SSE2P32590 693 aaKnown RBP11.75□□□□□ -0.53
LSM3YLR438C-A RCY1P39531 840 aa11.75□□□□□ -0.53
LSM3YLR438C-A CUP9P41817 306 aa11.75□□□□□ -0.53
LSM3YLR438C-A LEM3P42838 414 aa11.75□□□□□ -0.53
LSM3YLR438C-A MAL11P53048 616 aa11.75□□□□□ -0.53
LSM3YLR438C-A MPC1P53157 130 aaKnown RBP11.75□□□□□ -0.53
LSM3YLR438C-A CTL1Q03220 320 aaKnown RBP11.75□□□□□ -0.53
LSM3YLR438C-A INP1Q03694 420 aa11.75□□□□□ -0.53
LSM3YLR438C-A URC2Q04411 772 aa11.75□□□□□ -0.53
LSM3YLR438C-A RNH202Q05635 350 aa11.75□□□□□ -0.53
LSM3YLR438C-A REH1Q06709 432 aa11.75□□□□□ -0.53
LSM3YLR438C-A FRE7Q12333 620 aa11.75□□□□□ -0.53
LSM3YLR438C-A RIB3Q99258 208 aa11.75□□□□□ -0.53
LSM3YLR438C-A CSF1Q12150 2958 aa11.75□□□□□ -0.53
LSM3YLR438C-A MOD5P07884 428 aa11.74□□□□□ -0.53
LSM3YLR438C-A SAC1P32368 623 aaKnown RBP11.74□□□□□ -0.53
LSM3YLR438C-A ORC2P32833 620 aa11.74□□□□□ -0.53
LSM3YLR438C-A SEC61P32915 480 aa11.74□□□□□ -0.53
LSM3YLR438C-A PDS1P40316 373 aaPredicted RBP11.74□□□□□ -0.53
LSM3YLR438C-A YRB2P40517 327 aa11.74□□□□□ -0.53
LSM3YLR438C-A MDV1P47025 714 aa11.74□□□□□ -0.53
LSM3YLR438C-A LCL3P53153 274 aa11.74□□□□□ -0.53
LSM3YLR438C-A PRM8P53174 237 aa11.74□□□□□ -0.53
LSM3YLR438C-A YLR460CP54007 376 aa11.74□□□□□ -0.53
LSM3YLR438C-A YPL068CQ02749 293 aa11.74□□□□□ -0.53
LSM3YLR438C-A TPO4Q12256 659 aa11.74□□□□□ -0.53
LSM3YLR438C-A YLR126CQ12288 251 aa11.74□□□□□ -0.53
LSM3YLR438C-A RHO1P06780 209 aaKnown RBP11.73□□□□□ -0.53
LSM3YLR438C-A RRP7P25368 297 aaPredicted RBP11.73□□□□□ -0.53
LSM3YLR438C-A RPC82P32349 654 aa11.73□□□□□ -0.53
LSM3YLR438C-A ECM34P38728 170 aa11.73□□□□□ -0.53
LSM3YLR438C-A ANS1P38832 159 aa11.73□□□□□ -0.53
LSM3YLR438C-A PZF1P39933 429 aa11.73□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms