RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	TIM9	O74700	87 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	MDJ1	P35191	511 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	VPS51	P36116	164 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	SLM4	P38247	162 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	APS3	P47064	194 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	MAL11	P53048	616 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	TWF1	P53250	332 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	YNL181W	P53878	407 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	RSM10	Q03201	203 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	NAT4	Q04751	285 aa		14.38	□□□□□ -0.11
CCC1	YLR220W	PUS7	Q08647	676 aa	Known RBP	14.38	□□□□□ -0.11
CCC1	YLR220W	NAR1	P23503	491 aa	Known RBP	14.37	□□□□□ -0.11
CCC1	YLR220W	PBN1	P25580	416 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	POL4	P25615	582 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	ORC2	P32833	620 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	RCY1	P39531	840 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	YGR067C	P53243	804 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	MTQ1	P53944	314 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	KRE28	Q04431	385 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	MRX4	Q12467	430 aa		14.37	□□□□□ -0.11
CCC1	YLR220W	RPS21B	Q3E754	87 aa	Known RBP	14.37	□□□□□ -0.11
CCC1	YLR220W	ATR1	P13090	542 aa		14.36	□□□□□ -0.11
CCC1	YLR220W	CDC3	P32457	520 aa	Known RBP	14.36	□□□□□ -0.11
CCC1	YLR220W	ALG3	P38179	458 aa		14.36	□□□□□ -0.11
CCC1	YLR220W	ANS1	P38832	159 aa		14.36	□□□□□ -0.11
CCC1	YLR220W	ARI1	P53111	347 aa	Known RBP	14.36	□□□□□ -0.11
CCC1	YLR220W	CDC4	P07834	779 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	SUI3	P09064	285 aa	Known RBP	14.35	□□□□□ -0.11
CCC1	YLR220W	RPL20A	P0CX23	172 aa	Known RBP	14.35	□□□□□ -0.11
CCC1	YLR220W	RPL20B	P0CX24	172 aa	Predicted RBP	14.35	□□□□□ -0.11
CCC1	YLR220W	FBA1	P14540	359 aa	Known RBP	14.35	□□□□□ -0.11
CCC1	YLR220W	GPI12	P23797	304 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	14.35	□□□□□ -0.11	not detected
CCC1	YLR220W	MRPL6	P32904	214 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	BIT61	P47041	543 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	YPL107W	Q02873	248 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	CTL1	Q03220	320 aa	Known RBP	14.35	□□□□□ -0.11
CCC1	YLR220W	BDS1	Q08347	646 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	VIK1	Q12045	647 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	YPL066W	Q12194	479 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	MMP1	Q12372	583 aa		14.35	□□□□□ -0.11
CCC1	YLR220W	PAR32	Q12515	295 aa	Known RBP	14.35	□□□□□ -0.11
CCC1	YLR220W	BAR1	P12630	587 aa		14.34	□□□□□ -0.11
CCC1	YLR220W	RER1	P25560	188 aa		14.34	□□□□□ -0.11
CCC1	YLR220W	BUD14	P27637	709 aa		14.34	□□□□□ -0.11
CCC1	YLR220W	GSH1	P32477	678 aa		14.34	□□□□□ -0.11
CCC1	YLR220W	SEA4	P38164	1038 aa		14.34	□□□□□ -0.11
CCC1	YLR220W	PAC1	P39946	494 aa	Known RBP	14.34	□□□□□ -0.11
CCC1	YLR220W	BAP3	P41815	604 aa		14.34	□□□□□ -0.11
CCC1	YLR220W	RSA1	Q08932	381 aa		14.34	□□□□□ -0.11
CCC1	YLR220W	YPT1	P01123	206 aa	Known RBP	14.33	□□□□□ -0.12
CCC1	YLR220W	PDR3	P33200	976 aa		14.33	□□□□□ -0.12
CCC1	YLR220W	GDH2	P33327	1092 aa	Known RBP	14.33	□□□□□ -0.12
CCC1	YLR220W	NUF2	P33895	451 aa		14.33	□□□□□ -0.12
CCC1	YLR220W	MET28	P40573	187 aa		14.33	□□□□□ -0.12
CCC1	YLR220W	YJR142W	P47173	342 aa		14.33	□□□□□ -0.12
CCC1	YLR220W	RNH202	Q05635	350 aa		14.33	□□□□□ -0.12
CCC1	YLR220W	YSF3	P0C074	85 aa	Predicted RBP	14.32	□□□□□ -0.12
CCC1	YLR220W	RPN2	P32565	945 aa	Known RBP	14.32	□□□□□ -0.12
CCC1	YLR220W	TOD6	P34219	525 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	THO1	P40040	218 aa	Known RBP	14.32	□□□□□ -0.12
CCC1	YLR220W	YIL067C	P40514	678 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	SMK1	P41808	388 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	YFL066C	P43538	392 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	CAK1	P43568	368 aa	Predicted RBP	14.32	□□□□□ -0.12
CCC1	YLR220W	MDV1	P47025	714 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	SWP1	Q02795	286 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	ERF2	Q06551	359 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	REH1	Q06709	432 aa		14.32	□□□□□ -0.12
CCC1	YLR220W	AI1	P03875	834 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	MOD5	P07884	428 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	YBR139W	P38109	508 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	CUP9	P41817	306 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	FAR7	P43592	221 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	YJR141W	P47172	347 aa	Predicted RBP	14.31	□□□□□ -0.12
CCC1	YLR220W	VMA10	P48836	114 aa	Known RBP	14.31	□□□□□ -0.12
CCC1	YLR220W	IMD4	P50094	524 aa	Known RBP	14.31	□□□□□ -0.12
CCC1	YLR220W	MPC1	P53157	130 aa	Known RBP	14.31	□□□□□ -0.12
CCC1	YLR220W	YDR541C	Q03049	344 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	HOT1	Q03213	719 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	MDM30	Q05930	598 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	SWA2	Q06677	668 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	YDL211C	Q12121	372 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	RIB3	Q99258	208 aa		14.31	□□□□□ -0.12
CCC1	YLR220W	KSS1	P14681	368 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	LDB16	P25587	256 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	UBC8	P28263	218 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	GID8	P40208	455 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	NUP57	P48837	541 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	OCA1	P50946	238 aa	Predicted RBP	14.3	□□□□□ -0.12
CCC1	YLR220W	MPA43	P53583	542 aa	Predicted RBP	14.3	□□□□□ -0.12
CCC1	YLR220W	DFG5	Q05031	458 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	AKR2	Q12013	749 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	YOR214C	Q12282	236 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	PSF1	Q12488	208 aa		14.3	□□□□□ -0.12
CCC1	YLR220W	YOL163W	P0CF20	169 aa		14.29	□□□□□ -0.12
CCC1	YLR220W	PET9	P18239	318 aa	Known RBP	14.29	□□□□□ -0.12
CCC1	YLR220W	YCK1	P23291	538 aa		14.29	□□□□□ -0.12
CCC1	YLR220W	SNO3	P43544	222 aa		14.29	□□□□□ -0.12
CCC1	YLR220W	SEH1	P53011	349 aa	Known RBP	14.29	□□□□□ -0.12

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms