RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C COX13P32799 129 aa3.3□□□□□ -1.88
RPF2YKR081C RAD5P32849 1169 aaPredicted RBP3.3□□□□□ -1.88
RPF2YKR081C GPI18P38211 433 aa3.3□□□□□ -1.88
RPF2YKR081C ALD5P40047 520 aaKnown RBP3.3□□□□□ -1.88
RPF2YKR081C ZIM17P42844 174 aa3.3□□□□□ -1.88
RPF2YKR081C YPS5P53057 165 aa3.3□□□□□ -1.88
RPF2YKR081C SPR6Q01684 191 aa3.3□□□□□ -1.88
RPF2YKR081C SKI8Q02793 397 aaPredicted RBP3.3□□□□□ -1.88
RPF2YKR081C YDL114WQ07530 308 aa3.3□□□□□ -1.88
RPF2YKR081C SSC1P0CS90 654 aaKnown RBP3.29□□□□□ -1.88
RPF2YKR081C SKT5P34226 696 aa3.29□□□□□ -1.88
RPF2YKR081C STP2P38704 541 aa3.29□□□□□ -1.88
RPF2YKR081C PIB2P53191 635 aa3.29□□□□□ -1.88
RPF2YKR081C AIM32Q04689 311 aa3.29□□□□□ -1.88
RPF2YKR081C YDR341CQ05506 607 aaKnown RBP3.29□□□□□ -1.88
RPF2YKR081C YLR345WQ06137 509 aa3.29□□□□□ -1.88
RPF2YKR081C YLR456WQ06199 204 aa3.29□□□□□ -1.88
RPF2YKR081C YPR091CQ06833 770 aa3.29□□□□□ -1.88
RPF2YKR081C PRB1P09232 635 aa3.28□□□□□ -1.88
RPF2YKR081C ZRC1P20107 442 aa3.28□□□□□ -1.88
RPF2YKR081C DBF4P32325 704 aa3.28□□□□□ -1.88
RPF2YKR081C TIM17P39515 158 aa3.28□□□□□ -1.88
RPF2YKR081C NSE1Q07913 336 aa3.28□□□□□ -1.88
RPF2YKR081C ISA2Q12425 185 aa3.28□□□□□ -1.88
RPF2YKR081C FAB1P34756 2278 aa3.28□□□□□ -1.88
RPF2YKR081C MDH1P17505 334 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
RPF2YKR081C DEP1P31385 405 aa3.27□□□□□ -1.89
RPF2YKR081C AIP1P46680 615 aaKnown RBP3.27□□□□□ -1.89
RPF2YKR081C STE24P47154 453 aa3.27□□□□□ -1.89
RPF2YKR081C YGR111WP53265 400 aa3.27□□□□□ -1.89
RPF2YKR081C KTR6P54070 446 aa3.27□□□□□ -1.89
RPF2YKR081C TPS1Q00764 495 aaKnown RBP3.27□□□□□ -1.89
RPF2YKR081C PRP3Q03338 469 aaPredicted RBP3.27□□□□□ -1.89
RPF2YKR081C IES4Q08561 116 aa3.27□□□□□ -1.89
RPF2YKR081C FCY22Q12119 530 aa3.27□□□□□ -1.89
RPF2YKR081C FOL3Q12676 427 aaPredicted RBP3.27□□□□□ -1.89
RPF2YKR081C FUN26P31381 517 aa3.26□□□□□ -1.89
RPF2YKR081C GPI16P38875 610 aa3.26□□□□□ -1.89
RPF2YKR081C FAD1P38913 306 aa3.26□□□□□ -1.89
RPF2YKR081C IGD1P43598 195 aa3.26□□□□□ -1.89
RPF2YKR081C PGU1P47180 361 aa3.26□□□□□ -1.89
RPF2YKR081C YGR018CP53211 109 aa3.26□□□□□ -1.89
RPF2YKR081C TRM112P53738 135 aaPredicted RBP3.26□□□□□ -1.89
RPF2YKR081C UAF30Q08747 228 aa3.26□□□□□ -1.89
RPF2YKR081C ADH1P00330 348 aaKnown RBP3.25□□□□□ -1.89
RPF2YKR081C SLM5P25345 492 aaKnown RBP3.25□□□□□ -1.89
RPF2YKR081C DPH2P32461 534 aa3.25□□□□□ -1.89
RPF2YKR081C MCR1P36060 302 aaKnown RBP3.25□□□□□ -1.89
RPF2YKR081C ATM1P40416 690 aa3.25□□□□□ -1.89
RPF2YKR081C YGL262WP53054 175 aa3.25□□□□□ -1.89
RPF2YKR081C YOP1Q12402 180 aa3.25□□□□□ -1.89
RPF2YKR081C CCH1P50077 2039 aa3.24□□□□□ -1.89
RPF2YKR081C LTV1P34078 463 aa3.24□□□□□ -1.89
RPF2YKR081C GPX2P38143 162 aa3.24□□□□□ -1.89
RPF2YKR081C PFS1P38872 237 aa3.24□□□□□ -1.89
RPF2YKR081C FLC3P53121 802 aa3.24□□□□□ -1.89
RPF2YKR081C MCH1Q07376 486 aa3.24□□□□□ -1.89
RPF2YKR081C RNH203Q12338 110 aa3.24□□□□□ -1.89
RPF2YKR081C YDL199CQ12407 687 aa3.24□□□□□ -1.89
RPF2YKR081C PCL9Q12477 304 aa3.24□□□□□ -1.89
RPF2YKR081C TPK3P05986 398 aa3.23□□□□□ -1.89
RPF2YKR081C STE7P06784 515 aa3.23□□□□□ -1.89
RPF2YKR081C NRP1P32770 719 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RPF2YKR081C DOA1P36037 715 aa3.23□□□□□ -1.89
RPF2YKR081C MRPL27P36526 146 aaPredicted RBP3.23□□□□□ -1.89
RPF2YKR081C ECM8P38246 354 aa3.23□□□□□ -1.89
RPF2YKR081C YIP5P53108 310 aa3.23□□□□□ -1.89
RPF2YKR081C DCI1Q08558 271 aa3.23□□□□□ -1.89
RPF2YKR081C PDE2P06776 526 aa3.22□□□□□ -1.89
RPF2YKR081C RPL12AP0CX53 165 aaKnown RBP3.22□□□□□ -1.89
RPF2YKR081C RPL12BP0CX54 165 aa3.22□□□□□ -1.89
RPF2YKR081C ARF1P11076 181 aaKnown RBP3.22□□□□□ -1.89
RPF2YKR081C PHO91P27514 894 aa3.22□□□□□ -1.89
RPF2YKR081C QDR3P38227 689 aa3.22□□□□□ -1.89
RPF2YKR081C LSM12P38828 187 aaKnown RBP3.22□□□□□ -1.89
RPF2YKR081C TOS2P50078 622 aa3.22□□□□□ -1.89
RPF2YKR081C RRN9P53437 365 aa3.22□□□□□ -1.89
RPF2YKR081C OPI3P05375 206 aa3.21□□□□□ -1.9
RPF2YKR081C GIT1P25346 518 aa3.21□□□□□ -1.9
RPF2YKR081C TIR2P33890 251 aa3.21□□□□□ -1.9
RPF2YKR081C GEP4P38812 185 aa3.21□□□□□ -1.9
RPF2YKR081C PAC11P40960 533 aa3.21□□□□□ -1.9
RPF2YKR081C ROG1P53118 685 aa3.21□□□□□ -1.9
RPF2YKR081C URC2Q04411 772 aa3.21□□□□□ -1.9
RPF2YKR081C MEX67Q99257 599 aaKnown RBP3.21□□□□□ -1.9
RPF2YKR081C ZUO1P32527 433 aaKnown RBP3.2□□□□□ -1.9
RPF2YKR081C ECT1P33412 323 aa3.2□□□□□ -1.9
RPF2YKR081C SPO23P33757 523 aa3.2□□□□□ -1.9
RPF2YKR081C SEC9P40357 651 aa3.2□□□□□ -1.9
RPF2YKR081C PMT5P52867 743 aa3.2□□□□□ -1.9
RPF2YKR081C VHT1P53241 593 aa3.2□□□□□ -1.9
RPF2YKR081C ECM7Q06200 448 aa3.2□□□□□ -1.9
RPF2YKR081C YSC83P32792 385 aa3.19□□□□□ -1.9
RPF2YKR081C BUD27P43573 796 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
RPF2YKR081C YFL012WP43580 148 aa3.19□□□□□ -1.9
RPF2YKR081C TRF5P48561 642 aaKnown RBP3.19□□□□□ -1.9
RPF2YKR081C YPL107WQ02873 248 aa3.19□□□□□ -1.9
RPF2YKR081C YDR541CQ03049 344 aa3.19□□□□□ -1.9
RPF2YKR081C NDL1Q06568 189 aa3.19□□□□□ -1.9
RPF2YKR081C ASA1Q06822 443 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms