RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeastyeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKT6YKL196C YMR209CQ03648 457 aa3.29□□□□□ -1.88
YKT6YKL196C YML053CQ04978 212 aa3.29□□□□□ -1.88
YKT6YKL196C YLL007CQ07799 665 aa3.29□□□□□ -1.88
YKT6YKL196C PML1Q07930 204 aaPredicted RBP3.29□□□□□ -1.88
YKT6YKL196C RDR1Q08904 546 aa3.29□□□□□ -1.88
YKT6YKL196C NBP2Q12163 236 aa3.29□□□□□ -1.88
YKT6YKL196C YLR108CQ12259 485 aa3.29□□□□□ -1.88
YKT6YKL196C SFM1Q12314 213 aa3.29□□□□□ -1.88
YKT6YKL196C GPM3Q12326 303 aa3.29□□□□□ -1.88
YKT6YKL196C YDR262WQ12331 272 aa3.29□□□□□ -1.88
YKT6YKL196C RPN6Q12377 434 aa3.29□□□□□ -1.88
YKT6YKL196C EFG1Q3E705 233 aaKnown RBP3.29□□□□□ -1.88
YKT6YKL196C TAF2P23255 1407 aa3.28□□□□□ -1.88
YKT6YKL196C CDC28P00546 298 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C BI2P03873 423 aa3.28□□□□□ -1.88
YKT6YKL196C CMD1P06787 147 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C NUC1P08466 329 aa3.28□□□□□ -1.88
YKT6YKL196C RPS24AP0CX31 135 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C RPS24BP0CX32 135 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C RPL1AP0CX43 217 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C RPL1BP0CX44 217 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C SNA3P14359 133 aa3.28□□□□□ -1.88
YKT6YKL196C APE1P14904 514 aa3.28□□□□□ -1.88
YKT6YKL196C UBC1P21734 215 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C SLY1P22213 666 aa3.28□□□□□ -1.88
YKT6YKL196C AIM17P23180 465 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C AAT2P23542 418 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C CLB2P24869 491 aa3.28□□□□□ -1.88
YKT6YKL196C CHA1P25379 360 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C DCC1P25559 380 aa3.28□□□□□ -1.88
YKT6YKL196C YCR051WP25631 222 aa3.28□□□□□ -1.88
YKT6YKL196C PPA2P28239 310 aa3.28□□□□□ -1.88
YKT6YKL196C PRO3P32263 286 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C NDI1P32340 513 aa3.28□□□□□ -1.88
YKT6YKL196C HXT3P32466 567 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C PDB1P32473 366 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C GSH1P32477 678 aa3.28□□□□□ -1.88
YKT6YKL196C DOA1P36037 715 aa3.28□□□□□ -1.88
YKT6YKL196C STB6P36085 766 aa3.28□□□□□ -1.88
YKT6YKL196C YKL071WP36086 256 aa3.28□□□□□ -1.88
YKT6YKL196C FMP23P38231 175 aa3.28□□□□□ -1.88
YKT6YKL196C RFS1P38234 210 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C SPP381P38282 291 aaPredicted RBP3.28□□□□□ -1.88
YKT6YKL196C CYC2P38909 366 aa3.28□□□□□ -1.88
YKT6YKL196C CCT2P39076 527 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C CCT6P39079 546 aa3.28□□□□□ -1.88
YKT6YKL196C PCF11P39081 626 aaPredicted RBP3.28□□□□□ -1.88
YKT6YKL196C RGI2P40188 164 aa3.28□□□□□ -1.88
YKT6YKL196C SER33P40510 469 aa3.28□□□□□ -1.88
YKT6YKL196C YIL024CP40543 189 aa3.28□□□□□ -1.88
YKT6YKL196C IRC7P43623 340 aa3.28□□□□□ -1.88
YKT6YKL196C YAR1P46683 200 aa3.28□□□□□ -1.88
YKT6YKL196C EFM3P47163 339 aa3.28□□□□□ -1.88
YKT6YKL196C PSP1P50896 841 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C SCS3P53012 380 aa3.28□□□□□ -1.88
YKT6YKL196C MRM2P53123 320 aa3.28□□□□□ -1.88
YKT6YKL196C DUO1P53168 247 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C RPT4P53549 437 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C VPS75P53853 264 aa3.28□□□□□ -1.88
YKT6YKL196C AQR1P53943 586 aa3.28□□□□□ -1.88
YKT6YKL196C YPL068CQ02749 293 aa3.28□□□□□ -1.88
YKT6YKL196C SKI8Q02793 397 aaPredicted RBP3.28□□□□□ -1.88
YKT6YKL196C YDR248CQ03786 193 aa3.28□□□□□ -1.88
YKT6YKL196C APC4Q04601 652 aa3.28□□□□□ -1.88
YKT6YKL196C ROY1Q04847 553 aa3.28□□□□□ -1.88
YKT6YKL196C SKG3Q06315 1026 aa3.28□□□□□ -1.88
YKT6YKL196C YET3Q07451 203 aa3.28□□□□□ -1.88
YKT6YKL196C NSE1Q07913 336 aa3.28□□□□□ -1.88
YKT6YKL196C APC9Q12107 265 aa3.28□□□□□ -1.88
YKT6YKL196C UBX3Q12229 455 aa3.28□□□□□ -1.88
YKT6YKL196C YOL107WQ12239 342 aa3.28□□□□□ -1.88
YKT6YKL196C LCB4Q12246 624 aa3.28□□□□□ -1.88
YKT6YKL196C PAA1Q12447 191 aaKnown RBP3.28□□□□□ -1.88
YKT6YKL196C TFB5Q3E7C1 72 aaPredicted RBP3.28□□□□□ -1.88
YKT6YKL196C RGS2Q99188 309 aa3.28□□□□□ -1.88
YKT6YKL196C AI5_BETAQ9ZZX0 354 aa3.28□□□□□ -1.88
YKT6YKL196C COS2P0CX12 379 aa3.27□□□□□ -1.89
YKT6YKL196C COS3P0CX13 379 aa3.27□□□□□ -1.89
YKT6YKL196C CBS2P14905 389 aa3.27□□□□□ -1.89
YKT6YKL196C EST1P17214 699 aaPredicted RBP3.27□□□□□ -1.89
YKT6YKL196C UGA1P17649 471 aa3.27□□□□□ -1.89
YKT6YKL196C MAK32P23060 363 aa3.27□□□□□ -1.89
YKT6YKL196C CNA1P23287 553 aa3.27□□□□□ -1.89
YKT6YKL196C CPR4P25334 318 aa3.27□□□□□ -1.89
YKT6YKL196C ADE1P27616 306 aa3.27□□□□□ -1.89
YKT6YKL196C AFG1P32317 509 aa3.27□□□□□ -1.89
YKT6YKL196C RNP1P32385 249 aa3.27□□□□□ -1.89
YKT6YKL196C GCD7P32502 381 aaPredicted RBP3.27□□□□□ -1.89
YKT6YKL196C ATO2P32907 282 aa3.27□□□□□ -1.89
YKT6YKL196C RPS1AP33442 255 aaKnown RBP3.27□□□□□ -1.89
YKT6YKL196C UPS2P35200 230 aa3.27□□□□□ -1.89
YKT6YKL196C DTR1P38125 572 aa3.27□□□□□ -1.89
YKT6YKL196C SHE3P38272 425 aaKnown RBP3.27□□□□□ -1.89
YKT6YKL196C URA8P38627 578 aaPredicted RBP3.27□□□□□ -1.89
YKT6YKL196C GRE3P38715 327 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
YKT6YKL196C AXL2P38928 823 aa3.27□□□□□ -1.89
YKT6YKL196C SSP120P39931 234 aaKnown RBP3.27□□□□□ -1.89
YKT6YKL196C YAT2P40017 923 aa3.27□□□□□ -1.89
YKT6YKL196C EFM4P40516 257 aa3.27□□□□□ -1.89
YKT6YKL196C COS4P43542 379 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms